Items where Author is "Seal, Susan"

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abundance Africa agricultural pests and plant-virus disease vectors agro-ecological regions agro-ecological zone alata alpha-glucosidase ancestral geographic ranges aphids aquaporin Asia 1 mtCOI bacilliform virus Bacterial endosymbionts Badna-PCR Badnavirus Bemisia Bemisia tabaci Bemisia tabaci whitefly species bioinformatics biological species biological traits biosafety biotechnology Busco canna Capacity building cassava cassava brown streak disease cassava brown streak ipomoviruses cassava brown streak viruses Cassava mosaic disease cassava mosaic-virus cladogenesis common bean comparative genomics constitutive and plastic expression control crop biotechnology crop yields cryptic species damage detoxification diagnostic diagnostics Diet breadth Differential transmission Dioscorea spp. Dioscorea yam disease Diversification diversity dna DNA extraction DNA satellite molecules DNA transposons early virus detection ELISA emerging disease epidemics Endogenous pararetrovirus Endogenous pararetroviruses endosymbiont epidemiology Episomal badnavirus expression Fastqc five families: Caulimoviridae food security geminiviruses gene expression gene flow gene silencing gene targets genetic differentiation genetic variation genome assembly Ghana glutathione S-transferase haplotype Hepadnaviridae horizontal genes horizontally acquired genes host adaptation host range host-plants ICTV report and caulimoviridae Illumina adapters Immunosorbent electron microscopy impact Insect‐plant interactions insect–plant interactions Invasiveness isothermal amplification LAMP leaf beetle leaf curl virus life-history traits liquid-chromatography lysine Maize streak virus management implications MED-ASL Metaviridae microsatellites mitochondrial DNA Mitochondrial phylogenetic groups model law molecular evolution molecular mechanisms MSV mtCOI myzus-persicae homoptera next generation sequencing Nigeria Ootheca spp. Optimal foraging theory Optimal oviposition theory osmoregulation PCR performance pest pest management phylogenetics phylogenomic tree phylogenomics plant damage policy polyphagy Portiera positive selection Potyvirus Pseudoviridae quality control quantitative real-time (QRT)-PCR Quast RAD-Seq rapid diagnosis Rapid diagnostics reciprocal crossing Recombinase polymerase amplification recombination regulation reproductive compatibility Retroviridae Reverse transcriptase recombinase polymerase amplification (RT-RPA) Reverse-transcribing viruses rhopalosiphum-padi homoptera RNA interference Rolling circle amplification RT-LAMP RT-qPCR sap-feeding insect seed systems species complex species tree spotted wilt virus Sri Lankan cassava mosaic virus SSA1-SG1 SSA3 sub-Saharan Africa species sucrase superabundance Survival analysis swollen shoot virus symbiosis tabaci gennadius hemiptera taxonomic changes taxonomy TE annotation The International Committee on Taxonomy of Viruses (ICTV) transcription profiling transcriptome transcriptome assembly transposable elements transposons Trimmomatic trinity Uganda virus virus diagnostics Virus transmission West Africa whiteflies whitefly Whitefly complex whitefly species whitefly-transmitted geminiviruses yam Yam mosaic virus yellow-dwarf-virus

Number of items: 223.

abundance

Halerimana, Charles, Kayamanywa, Samuel, Olaboro, Samuel, Paparu, Pamela, Nakalubo, Stanley T., Colvin, John, Cheke, Robert ORCID: https://orcid.org/0000-0002-7437-1934, Wagner, Thomas, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Kriticos, Darren J. and Otim, Michael H. (2021) Distribution and relative abundance of bean leaf beetles (Ootheca spp.) (Insecta: Coleoptera: Chrysomelidae) in Uganda. Insects (Special Issue Parasite-Insect Interactions), 12 (11):1048. pp. 1-12. ISSN 2075-4450 (Print), 2075-4450 (Online) (doi:10.3390/insects12111048)

Africa

Black, Robert ORCID: https://orcid.org/0000-0001-6596-882X, Fava, Fabio, Mattei, Niccolo, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Verdier, Valerie (2011) Case studies on the use of biotechnologies and on biosafety provisions in four African countries. Journal of Biotechnology, 156 (4). pp. 370-381. ISSN 0168-1656 (doi:10.1016/j.jbiotec.2011.06.036)

agricultural pests and plant-virus disease vectors

Mugerwa, Habibu, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Wang, Hua-Ling, Patel, Mitulkumar V., Kabaalu, Richard, Omongo, Christopher A., Alicai, Titus, Tairo, Fred, Ndunguru, Joseph, Sseruwagi, Peter and Colvin, John (2018) African ancestry of New World, Bemisia tabaci-whitefly species. Scientific Reports, 8 (1):2734. ISSN 2045-2322 (Print), 2045-2322 (Online) (doi:10.1038/s41598-018-20956-3)

agro-ecological regions

Namuddu, Annet, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Malka, Osnat, Kabaalu, Richard, Morin, Shai, Omongo, Christopher and Colvin, John (2023) Distribution of Bemisia tabaci in different agro-ecological regions in Uganda and the threat of vector-borne pandemics into new cassava growing areas. Frontiers in Sustainable Food Systems, 7:106810. pp. 1-15. ISSN 2571-581X (Online) (doi:10.3389/fsufs.2023.1068109)

agro-ecological zone

alata

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:10.1007/s00705-006-0888-7)

alpha-glucosidase

Kaweesi, Tadeo, Colvin, John, Campbell, Lahcen, Visendi, Paul, Maslen, Gareth, Alicai, Titus and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2024) In silico prediction of candidate gene targets for the management of African cassava whitefly (Bemisia tabaci, SSA1-SG1), a key vector of viruses causing cassava brown streak disease. PeerJ – the Journal of Life and Environmental Sciences, 12:e16949. pp. 1-27. ISSN 2167-8359 (Online) (doi:10.7717/peerj.16949)

ancestral geographic ranges

Wang, Hua-Ling, Geng, Shi-Long, Liu, Shu-Sheng, Li, Zhong-Tao, Cameron, Stephen, Lei, Teng, Xu, Wei, Liu, Qing, Zuo, Shuang, Omongo, Christopher A., Maruthi, M.N. ORCID: https://orcid.org/0000-0002-8060-866X, Mugerwa, Habibu, Wang, Xiao-Wei, Liu, Yin-Quan, Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Lee, Kyeong-Yeoll, Krause-Sakate, Renate, Delatte, Hélène, Ng, James, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Colvin, John (2024) Unraveling the cryptic Bemisia tabaci species complex: global phylogenomic analysis reveals evolutionary relationships and biogeographic patterns. Insect Science. ISSN 1672-9609 (Print), 1744-7917 (Online) (In Press)

aphids

Nanyiti, Sarah, Kabaalu, Richard, Alicai, Titus, Abidrabo, Phillip, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Bouvaine, Sophie ORCID: https://orcid.org/0000-0002-0788-3243, Bailey, A and Foster, Gary (2023) Detection of cassava brown streak ipomoviruses in aphids collected from cassava plants. Frontiers in Sustainable Food Systems, 7:1027842. pp. 1-9. ISSN 2571-581X (Online) (doi:10.3389/fsufs.2023.1027842)

aquaporin

Asia 1 mtCOI

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Patel, Mitulkumar V., Collins, Carl, Colvin, John and Bailey, David (2012) Next generation transcriptome sequencing and quantitative real-time PCR technologies for characterisation of the Bemisia tabaci Asia 1 mtCOI phylogenetic clade. Journal of Integrative Agriculture, 11 (2). pp. 281-292. ISSN 2095-3119 (doi:10.1016/S2095-3119(12)60012-4)

bacilliform virus

Bacterial endosymbionts

Vyskočilová, Soňa ORCID: https://orcid.org/0000-0001-5296-4272, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Colvin, John ORCID: https://orcid.org/0000-0001-6413-580X (2019) Relative polyphagy of “Mediterranean” cryptic Bemisia tabaci whitefly species and global pest status implications. Journal of Pest Science, 92 (3). pp. 1071-1088. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:10.1007/s10340-019-01113-9)

Badna-PCR

Bömer, Moritz ORCID: https://orcid.org/0000-0003-1003-9622, Turaki, Aliyu, Rathnayake, Ajith, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Lava Kumar, P. and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2018) Rolling circle amplification to screen yam germplasm for badnavirus infections and to amplify and characterise novel badnavirus genomes. Bio-protocol, 8 (1). ISSN 2331-8325 (Online) (doi:10.21769/BioProtoc.2672)

Badnavirus

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Turaki, Aliyu, Muller, Emmanuelle, Kumar, P. Lava, Kenyon, Lawrence, Filloux, Denis, Galzi, Serge, Lopez-Montes, Antonio and Iskra-Caruana, Marie-Line (2014) The prevalence of badnaviruses in West African yams (Dioscorea cayenensis-rotundata) and evidence of endogenous pararetrovirus sequences in their genomes. Virus Research, 186. pp. 144-154. ISSN 0168-1702 (Print), 1872-7492 (Online) (doi:10.1016/j.virusres.2014.01.007)

Bemisia

Namuddu, Annet, Malka, Osnat, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Kabaalu, Richard, Omongo, Christopher, Morin, Shai and Colvin, John (2024) Is polyphagy of a specific cryptic Bemisia tabaci species driving the high whitefly populations on cassava in eastern Africa? Journal of Pest Science. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:10.1007/s10340-024-01832-8)

Bemisia tabaci

Wang, Hualing, Lei, T, Wang, X-O, Cameron, S, Navas-Castillo, J, Liu, Y-Q, Maruthi, Midatharahally Narasegowda ORCID: https://orcid.org/0000-0002-8060-866X, Omongo, C, Delatte, H, Lee, K-Y, Krause-Sakate, R, Ng, J, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Fiallo-Olivé, E, Bushley, K, Colvin, John and Liu, S-S (2024) A comprehensive framework for the delimitation of species within the Bemisia tabaci cryptic complex, a global pest-species group. Insect Science. ISSN 1672-9609 (Print), 1744-7917 (Online) (doi:10.1111/1744-7917.13361)

Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: https://orcid.org/0000-0002-0788-3243 and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:10.1186/s13100-022-00270-6)

Bao, Xi-Yu, Yan, Jin-Yang, Ya-Lin Yao, Ya-Lin Yao, Yan-Bin Wang, Yan-Bin Wang, Visendi, Paull, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Luan, Jun-Bo (2021) Lysine provisioning by horizontally acquired genes promotes mutual dependence between whitefly and two intracellular symbionts. PLoS Pathogens, 17 (11):e1010120. ISSN 1553-7366 (Print), 1553-7374 (Online) (doi:10.1371/journal.ppat.1010120)

Mugerwa, Habibu ORCID: https://orcid.org/0000-0001-5077-0167, Wang, Hua‐Ling, Sseruwagi, Peter, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Colvin, John (2020) Whole‐genome single nucleotide polymorphism and mating compatibility studies reveal the presence of distinct species in sub‐Saharan Africa Bemisia tabaci whiteflies. Insect Science, 28 (6). pp. 1553-1566. ISSN 1672-9609 (Print), 1744-7917 (Online) (doi:10.1111/1744-7917.12881)

Malka, Osnat ORCID: https://orcid.org/0000-0003-0193-377X, Feldmesser, Ester, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Santos‐Garcia, Diego ORCID: https://orcid.org/0000-0002-3401-2662, Han, Wen‐Hao, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Colvin, John ORCID: https://orcid.org/0000-0001-6413-580X and Morin, Shai ORCID: https://orcid.org/0000-0003-2157-1999 (2020) The molecular mechanisms that determine different degrees of polyphagy in the Bemisia tabaci species complex. Evolutionary Applications, 14 (3). pp. 807-820. ISSN 1752-4563 (Print), 1752-4571 (Online) (doi:10.1111/eva.13162)

Chi, Yao, Pan, Li-Long, Bouvaine, Sophie ORCID: https://orcid.org/0000-0002-0788-3243, Fan, Yun-Yun, Liu, Yin-Quan, Liu, Shu-Sheng, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Wang, Xiao-Wei (2019) Differential transmission of Sri Lankan cassava mosaic virus by three cryptic species of the whitefly Bemisia tabaci complex. Virology, 15. pp. 141-149. ISSN 0042-6822 (doi:10.1016/j.virol.2019.11.013)

Malka, Osnat, Santos-Garcia, Diego, Feldmesser, Ester, Sharon, Elad, Krause-Sakate, Renate, Delatte, Hélène, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Patel, Mitulkumar, Muhindira, Paul Visendi, Mugerwa, Habibu, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Colvin, John and Morin, Shai (2018) Species-complex diversification and host-plant associations in Bemisia tabaci : a plant-defense, detoxification perspective revealed by RNAseq analyses. Molecular Ecology, 27 (21). pp. 4241-4256. ISSN 0962-1083 (Print), 1365-294X (Online) (doi:10.1111/mec.14865)

Vyskočilová, Soňa, Tay, Wee Tek, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Colvin, John (2018) An integrative approach to discovering cryptic species within the Bemisia tabaci whitefly species complex. Scientific Reports, 8:10886. ISSN 2045-2322 (Online) (doi:10.1038/s41598-018-29305-w)

Boykin, Laura M., Kinene, Tonny, Wainaina, James M., Savill, Anders, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Mugerwa, Habibu, Macfadyen, Sarina, Tay, Wee Tek, De Barro, Paul, Kubatko, Laura, Alicai, Titus, Omongo, Christopher A., Tairo, Fred, Ndunguru, Joseph and Sseruwagi, Peter (2018) Review and guide to a future naming system of African Bemisia tabaci species. Systematic Entomology, 43 (3). pp. 427-433. ISSN 0307-6970 (Print), 1365-3113 (Online) (doi:10.1111/syen.12294)

Collins, Carl, Patel, Mitulkumar V., Colvin, John, Bailey, David and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2014) Identification and evaluation of suitable reference genes for gene expression studies in the whitefly Bemisia tabaci (Asia I) by reverse transcription quantitative realtime PCR. Journal of Insect Science, 14 (1):63. pp. 1-25. ISSN 1536-2442 (doi:10.1673/031.014.63)

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Jeger, M.J. and vandenBosch, F. (2006) Factors influencing begomovirus evolution and their increasing global significance: implications for sustainable control. Critical Reviews in Plant Sciences, 25 (1). pp. 23-46. ISSN 0735-2689 (doi:10.1080/07352680500365257)

Bemisia tabaci whitefly species

bioinformatics

biological species

Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: https://orcid.org/0000-0002-9634-9463, Kaweesi, Tadeo, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: https://orcid.org/0000-0002-8060-866X, Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:10.1186/s12864-023-09474-3)

biological traits

Mugerwa, Habibu ORCID: https://orcid.org/0000-0001-5077-0167, Sseruwagi, Peter, Colvin, John and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2021) Is high whitefly abundance on cassava in sub-Saharan Africa driven by biological traits of a specific, cryptic Bemisia tabaci species? Insects, 12 (3):260. ISSN 2075-4450 (Online) (doi:10.3390/insects12030260)

biosafety

biotechnology

Busco

Sewe, Steven, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Sicat, Juan Paolo, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:10.1007/978-1-0716-2067-0_11)

canna

Monger, W.A., Harju, V., Skelton, A., Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Mumford, R.A. (2007) Brief Report: Canna yellow streak virus: a new potyvirus associated with severe streaking symptoms in canna. Archives of Virology, 152 (8). pp. 1527-1530. ISSN 0304-8608 (doi:10.1007/s00705-007-0977-2)

Capacity building

Tembo, Mathias, Adediji, Adedapo O., Bouvaine, Sophie ORCID: https://orcid.org/0000-0002-0788-3243, Chikoti, Patrick C., Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Silva, Gonҫalo ORCID: https://orcid.org/0000-0001-5544-2947 (2020) A quick and sensitive diagnostic tool for detection of Maize streak virus. Scientific Reports, 10:19633. ISSN 2045-2322 (Online) (doi:10.1038/s41598-020-76612-2)

cassava

cassava brown streak disease

cassava brown streak ipomoviruses

cassava brown streak viruses

Munguti, Florence M., Kilalo, Dora C., Yegon, Hillary K., Macharia, Isaac, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Mwango’mbe, Agnes W., Nyaboga, Evans N. and Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947 (2024) Real-time reverse transcription recombinase polymerase amplification (RT-RPA) assay for detection of cassava brown streak viruses. Scientific Reports, 14:12438. pp. 1-11. ISSN 2045-2322 (Online) (doi:10.1038/s41598-024-62249-y)

Cassava mosaic disease

cassava mosaic-virus

Colvin, John, Omongo, C.A., Govindappa, M.R., Stevenson, Philip C. ORCID: https://orcid.org/0000-0002-0736-3619, Maruthi, M.N. ORCID: https://orcid.org/0000-0002-8060-866X, Gibson, Gabriella, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Muniyappa, V. (2006) Host-plant viral infection effects on arthropod-vector population growth, development and behaviour: management and epidemiological implications. In: Maramorosch, Karl, Shatkin, Aaron J. and Thresh, J.M., (eds.) Plant Virus Epidemiology. Advances in Virus Research, 67 . Academic Press / Elsevier B.V., Amsterdam, The Netherlands, pp. 419-452. ISBN 978-0-12-039866-9 (ISBN-13) 0-12-039866-4 (ISBN-10) ISSN 0065-3527 (doi:10.1016/S0065-3527(06)67011-5)

cladogenesis

common bean

comparative genomics

constitutive and plastic expression

control

Diouf, Mame Boucar, Festus, Ruth, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Guyader, Sébastien, Umber, Marie, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Teycheney, Pierre Yves (2022) Viruses of yams (Dioscorea spp.): current gaps in knowledge and future research directions to improve disease management. Viruses, 14 (9):1884. pp. 1-23. ISSN 1999-4915 (Online) (doi:10.3390/v14091884)

crop biotechnology

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Sangare, A. and Makinde, M. (2008) Crop biotechnology and biosafety. SCARDA Briefing Papers Strengthening Capacity for Agricultural Research and Development in Africa. Forum for Agricultural Research in Africa, Accra, pp. 24-32. ISBN 978-9988-1-1063-4

crop yields

cryptic species

damage

detoxification

Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Harari, Ofer Aidlin, Santos-Garcia, Diego, Musseri, Mirit, Moshitzky, Pnina, Patel, Mitulkumar, Visendi, Paul, Sertchook, Rotem, Malka, Osnat and Morin, Shai (2020) Molecular evolution of the glutathione S-transferase family in the Bemisia tabaci species complex. Genome Biology and Evolution, 12 (2). pp. 3857-3872. ISSN 1759-6653 (Online) (doi:10.1093/gbe/evaa002)

diagnostic

diagnostics

Diet breadth

Differential transmission

Dioscorea spp.

Nkere, Chukwuemeka K., Otto, Emannuel, Atiri, Gabriel I., Onyeka, Joseph, Silva, Gonçalo ORCID: https://orcid.org/0000-0001-5544-2947, Bömer, Moritz ORCID: https://orcid.org/0000-0003-1003-9622, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Kumar, Lava P. (2020) Assessment of Yam mild mosaic virus coat protein gene sequence diversity reveals the prevalence of cosmopolitan and African group of isolates in Ghana and Nigeria. Current Plant Biology, 23:100156. ISSN 2214-6628 (Online) (doi:10.1016/j.cpb.2020.100156)

Dioscorea yam

disease

Diversification

diversity

dna

DNA extraction

DNA satellite molecules

DNA transposons

early virus detection

ELISA

emerging disease epidemics

Endogenous pararetrovirus

Endogenous pararetroviruses

endosymbiont

epidemiology

Episomal badnavirus

expression

Fastqc

five families: Caulimoviridae

Krupovic, Mart, Harrach, Balázs, Sabanadzovic, Sead, Sanfaçon, Hélène, Koonin, Eugene V., Kuhn, Jens H., Johnson, Welkin, Blomberg, Jonas, Coffin, John, Fan, Hung, Gifford, Robert, Lindemann, Dirk, Mayer, Jens, Stoye, Jonathan, Tristem, Michael, Teycheney, Pierre-Yves, Dasgupta, Idranil, Geering, Andrew, Hull, Roger, Kreuze, Jan F., Lockhart, Ben, Muller, Emmanuelle, Olszewski, Neil, Pappu, Hanu, Pooggin, Mikhail, Richert-Pöggeler, Katja, Schoelz, James E., Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Stavolone, Livia (2017) Creation of new order, Ortervirales, for 5 families of reverse-transcribing viruses. Technical Report. International Committee on Taxonomy of Viruses (ICTV). (doi:10.13140/RG.2.2.24914.04804)

food security

geminiviruses

gene expression

gene flow

Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:10.3390/insects13060543)

gene silencing

gene targets

genetic differentiation

genetic variation

genome assembly

Ghana

glutathione S-transferase

haplotype

Hepadnaviridae

horizontal genes

horizontally acquired genes

host adaptation

host range

host-plants

ICTV report and caulimoviridae

Teycheney, Pierre-Yves, Geering, Andrew D.W., Dasgupta, Idranil, Hull, Roger, Kreuze, Jan F., Lockhart, Ben, Muller, Emmanuelle, Olszewski, Neil, Pappu, Hanu, Pooggin, Mikhail M., Richert-Pöggeler, Katja R., Schoelz, James E., Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Stavolone, Livia and Umber, Marie (2020) ICTV virus taxonomy profile: caulimoviridae. Journal of General Virology, 101 (10). pp. 1025-1026. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:10.1099/jgv.0.001497)

Illumina adapters

Immunosorbent electron microscopy

impact

Insect‐plant interactions

insect–plant interactions

Invasiveness

isothermal amplification

Festus, Ruth, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Prempeh, Ruth, Quain, Marian D. and Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947 (2023) Improved Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) for the rapid and sensitive detection of Yam mosaic virus. Viruses, 15 (7):1592. pp. 1-17. ISSN 1999-4915 (Online) (doi:10.3390/v15071592)

Silva, Gonçalo ORCID: https://orcid.org/0000-0001-5544-2947, Oyekanmi, Joshua, Nkere, Chukwuemeka K., Bömer, Moritz ORCID: https://orcid.org/0000-0003-1003-9622, Kumar, Lava P. and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2018) Rapid detection of potyviruses from crude plant extracts. Analytical Biochemistry, 546. pp. 17-22. ISSN 0003-2697 (Print), 1096-0309 (Online) (doi:10.1016/j.ab.2018.01.019)

LAMP

leaf beetle

leaf curl virus

life-history traits

liquid-chromatography

lysine

Maize streak virus

management implications

MED-ASL

Metaviridae

microsatellites

mitochondrial DNA

Mitochondrial phylogenetic groups

model law

molecular evolution

molecular mechanisms

MSV

mtCOI

myzus-persicae homoptera

next generation sequencing

Nigeria

Ootheca spp.

Optimal foraging theory

Optimal oviposition theory

osmoregulation

PCR

performance

pest

pest management

phylogenetics

phylogenomic tree

phylogenomics

plant damage

policy

polyphagy

Portiera

positive selection

Potyvirus

Pseudoviridae

quality control

quantitative real-time (QRT)-PCR

Quast

RAD-Seq

rapid diagnosis

Rapid diagnostics

reciprocal crossing

Recombinase polymerase amplification

recombination

regulation

reproductive compatibility

Retroviridae

Reverse transcriptase recombinase polymerase amplification (RT-RPA)

Reverse-transcribing viruses

Krupovic, Mart, Blomberg, Jonas, Coffin, John M., Dasgupta, Indranil, Fan, Hung, Geering, Andrew D., Gifford, Robert, Harrach, Balázs, Hull, Roger, Johnson, Welkin, Kreuze, Jan F., Lindemann, Dirk, Llorens, Carlos, Lockhart, Ben, Mayer, Jens, Muller, Emmanuelle, Olszewski, Neil, Pappu, Hanu R., Pooggin, Mikhail, Richert-Pöggeler, Katja R., Sabanadzovic, Sead, Sanfaçon, Hélène, Schoelz, James E., Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Stavolone, Livia, Stoye, Jonathan P., Teycheney, Pierre-Yves, Tristem, Michael, Koonin, Eugene V. and Kuhn, Jens H. (2018) Ortervirales: A new viral order unifying five families of reverse-transcribing viruses. Journal of Virology, 92 (12). 00515-00518. ISSN 0022-538X (Print), 1098-5514 (Online) (doi:10.1128/JVI.00515-18)