Items where Author is "Edwards, David"
Sewe, Steven, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Sicat, Juan Paolo, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:10.1007/978-1-0716-2067-0_11)
Saratsi, Eirini, Acott, Timothy, Allinson, Ewan, Edwards, David, Fremantle, Chris and Fish, Robert (2019) Valuing Arts and Arts Research. Discussion Paper. Valuing Nature Paper VNP22.
Appels, Rudi, Eversole, Kellye, Feuillet, Catherine, Keller, Beat, Rogers, Jane, Stein, Nils, Pozniak, Curtis J., Stein, Nils, Choulet, Frédéric, Distelfeld, Assaf, Eversole, Kellye, Poland, Jesse, Rogers, Jane, Ronen, Gil, Sharpe, Andrew G., Pozniak, Curtis, Ronen, Gil, Stein, Nils, Barad, Omer, Baruch, Kobi, Choulet, Frédéric, Keeble-Gagnère, Gabriel, Mascher, Martin, Sharpe, Andrew G., Ben-Zvi, Gil, Josselin, Ambre-Aurore, Stein, Nils, Mascher, Martin, Himmelbach, Axel, Choulet, Frédéric, Keeble-Gagnère, Gabriel, Mascher, Martin, Rogers, Jane, Balfourier, François, Gutierrez-Gonzalez, Juan, Hayden, Matthew, Josselin, Ambre-Aurore, Koh, ChuShin, Muehlbauer, Gary, Pasam, Raj K., Paux, Etienne, Pozniak, Curtis J., Rigault, Philippe, Sharpe, Andrew G., Tibbits, Josquin, Tiwari, Vijay, Choulet, Frédéric, Keeble-Gagnère, Gabriel, Mascher, Martin, Josselin, Ambre-Aurore, Rogers, Jane, Spannagl, Manuel, Choulet, Frédéric, Lang, Daniel, Gundlach, Heidrun, Haberer, Georg, Keeble-Gagnère, Gabriel, Mayer, Klaus F. X., Ormanbekova, Danara, Paux, Etienne, Prade, Verena, Šimková, Hana, Wicker, Thomas, Choulet, Frédéric, Spannagl, Manuel, Swarbreck, David, Rimbert, Hélène, Felder, Marius, Guilhot, Nicolas, Gundlach, Heidrun, Haberer, Georg, Kaithakottil, Gemy, Keilwagen, Jens, Lang, Daniel, Leroy, Philippe, Lux, Thomas, Mayer, Klaus F. X., Twardziok, Sven, Venturini, Luca, Appels, Rudi, Rimbert, Hélène, Choulet, Frédéric, Juhász, Angéla, Keeble-Gagnère, Gabriel, Choulet, Frédéric, Spannagl, Manuel, Lang, Daniel, Abrouk, Michael, Haberer, Georg, Keeble-Gagnère, Gabriel, Mayer, Klaus F. X., Wicker, Thomas, Choulet, Frédéric, Wicker, Thomas, Gundlach, Heidrun, Lang, Daniel, Spannagl, Manuel, Lang, Daniel, Spannagl, Manuel, Appels, Rudi, Fischer, Iris, Uauy, Cristobal, Borrill, Philippa, Ramirez-Gonzalez, Ricardo H., Appels, Rudi, Arnaud, Dominique, Chalabi, Smahane, Chalhoub, Boulos, Choulet, Frédéric, Cory, Aron, Datla, Raju, Davey, Mark W., Hayden, Matthew, Jacobs, John, Lang, Daniel, Robinson, Stephen J., Spannagl, Manuel, Steuernagel, Burkhard, Tibbits, Josquin, Tiwari, Vijay, van Ex, Fred, Wulff, Brande B. H., Pozniak, Curtis J., Robinson, Stephen J., Sharpe, Andrew G., Cory, Aron, Benhamed, Moussa, Paux, Etienne, Bendahmane, Abdelhafid, Concia, Lorenzo, Latrasse, David, Rogers, Jane, Jacobs, John, Alaux, Michael, Appels, Rudi, Bartoš, Jan, Bellec, Arnaud, Berges, Hélène, Doležel, Jaroslav, Feuillet, Catherine, Frenkel, Zeev, Gill, Bikram, Korol, Abraham, Letellier, Thomas, Olsen, Odd-Arne, Šimková, Hana, Singh, Kuldeep, Valárik, Miroslav, van der Vossen, Edwin, Vautrin, Sonia, Weining, Song, Korol, Abraham, Frenkel, Zeev, Fahima, Tzion, Glikson, Vladimir, Raats, Dina, Rogers, Jane, Tiwari, Vijay, Gill, Bikram, Paux, Etienne, Poland, Jesse, Doležel, Jaroslav, Číhalíková, Jarmila, Šimková, Hana, Toegelová, Helena, Vrána, Jan, Sourdille, Pierre, Darrier, Benoit, Appels, Rudi, Spannagl, Manuel, Lang, Daniel, Fischer, Iris, Ormanbekova, Danara, Prade, Verena, Barabaschi, Delfina, Cattivelli, Luigi, Hernandez, Pilar, Galvez, Sergio, Budak, Hikmet, Steuernagel, Burkhard, Jones, Jonathan D. G., Witek, Kamil, Wulff, Brande B. H., Yu, Guotai, Small, Ian, Melonek, Joanna, Zhou, Ruonan, Juhász, Angéla, Belova, Tatiana, Appels, Rudi, Olsen, Odd-Arne, Kanyuka, Kostya, King, Robert, Nilsen, Kirby, Walkowiak, Sean, Pozniak, Curtis J., Cuthbert, Richard, Datla, Raju, Knox, Ron, Wiebe, Krysta, Xiang, Daoquan, Rohde, Antje, Golds, Timothy, Doležel, Jaroslav, Čížková, Jana, Tibbits, Josquin, Budak, Hikmet, Akpinar, Bala Ani, Biyiklioglu, Sezgi, Muehlbauer, Gary, Poland, Jesse, Gao, Liangliang, Gutierrez-Gonzalez, Juan, N’Daiye, Amidou, Doležel, Jaroslav, Šimková, Hana, Číhalíková, Jarmila, Kubaláková, Marie, Šafář, Jan, Vrána, Jan, Berges, Hélène, Bellec, Arnaud, Vautrin, Sonia, Alaux, Michael, Alfama, Françoise, Adam-Blondon, Anne-Françoise, Flores, Raphael, Guerche, Claire, Letellier, Thomas, Loaec, Mikaël, Quesneville, Hadi, Pozniak, Curtis J., Sharpe, Andrew G., Walkowiak, Sean, Budak, Hikmet, Condie, Janet, Ens, Jennifer, Koh, ChuShin, Maclachlan, Ron, Tan, Yifang, Wicker, Thomas, Choulet, Frédéric, Paux, Etienne, Alberti, Adriana, Aury, Jean-Marc, Balfourier, François, Barbe, Valérie, Couloux, Arnaud, Cruaud, Corinne, Labadie, Karine, Mangenot, Sophie, Wincker, Patrick, Gill, Bikram, Kaur, Gaganpreet, Luo, Mingcheng, Sehgal, Sunish, Singh, Kuldeep, Chhuneja, Parveen, Gupta, Om Prakash, Jindal, Suruchi, Kaur, Parampreet, Malik, Palvi, Sharma, Priti, Yadav, Bharat, Singh, Nagendra K., Khurana, JitendraP., Chaudhary, Chanderkant, Khurana, Paramjit, Kumar, Vinod, Mahato, Ajay, Mathur, Saloni, Sevanthi, Amitha, Sharma, Naveen, Tomar, Ram Sewak, Rogers, Jane, Jacobs, John, Alaux, Michael, Bellec, Arnaud, Berges, Hélène, Doležel, Jaroslav, Feuillet, Catherine, Frenkel, Zeev, Gill, Bikram, Korol, Abraham, van der Vossen, Edwin, Vautrin, Sonia, Gill, Bikram, Kaur, Gaganpreet, Luo, Mingcheng, Sehgal, Sunish, Bartoš, Jan, Holušová, Kateřina, Plíhal, Ondřej, Clark, Matthew D., Heavens, Darren, Kettleborough, George, Wright, Jon, Valárik, Miroslav, Abrouk, Michael, Balcárková, Barbora, Holušová, Kateřina, Hu, Yuqin, Luo, Mingcheng, Salina, Elena, Ravin, Nikolai, Skryabin, Konstantin, Beletsky, Alexey, Kadnikov, Vitaly, Mardanov, Andrey, Nesterov, Michail, Rakitin, Andrey, Sergeeva, Ekaterina, Handa, Hirokazu, Kanamori, Hiroyuki, Katagiri, Satoshi, Kobayashi, Fuminori, Nasuda, Shuhei, Tanaka, Tsuyoshi, Wu, Jianzhong, Appels, Rudi, Hayden, Matthew, Keeble-Gagnère, Gabriel, Rigault, Philippe, Tibbits, Josquin, Olsen, Odd-Arne, Belova, Tatiana, Cattonaro, Federica, Jiumeng, Min, Kugler, Karl, Mayer, Klaus F. X., Pfeifer, Matthias, Sandve, Simen, Xun, Xu, Zhan, Bujie, Šimková, Hana, Abrouk, Michael, Batley, Jacqueline, Bayer, Philipp E., Edwards, David, Hayashi, Satomi, Toegelová, Helena, Tulpová, Zuzana, Visendi, Paul, Weining, Song, Cui, Licao, Du, Xianghong, Feng, Kewei, Nie, Xiaojun, Tong, Wei, Wang, Le, Borrill, Philippa, Gundlach, Heidrun, Galvez, Sergio, Kaithakottil, Gemy, Lang, Daniel, Lux, Thomas, Mascher, Martin, Ormanbekova, Danara, Prade, Verena, Ramirez-Gonzalez, Ricardo H., Spannagl, Manuel, Stein, Nils, Uauy, Cristobal, Venturini, Luca, Stein, Nils, Appels, Rudi, Eversole, Kellye, Rogers, Jane, Borrill, Philippa, Cattivelli, Luigi, Choulet, Frédéric, Hernandez, Pilar, Kanyuka, Kostya, Lang, Daniel, Mascher, Martin, Nilsen, Kirby, Paux, Etienne, Pozniak, Curtis J., Ramirez-Gonzalez, Ricardo H., Šimková, Hana, Small, Ian, Spannagl, Manuel, Swarbreck, David and Uauy, Cristobal (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science, 361 (6403):eaar7191. ISSN 0036-8075 (Print), 1095-9203 (Online) (doi:10.1126/science.aar7191)
Tulpová, Zuzana, Luo, Ming-Cheng, Toegelová, Helena, Visendi, Paul, Hayashi, Satomi, Vojta, Petr, Paux, Etienne, Kilian, Andrzej, Abrouk, Michaël, Bartoš, Jan, Hajdúch, Marián, Batley, Jacqueline, Edwards, David, Doležel, Jaroslav and Šimková, Hana (2018) Integrated physical map of bread wheat chromosome arm 7DS to facilitate gene cloning and comparative studies. New Biotechnology, 48. pp. 12-19. ISSN 1871-6784 (Print), 1876-4347 (Online) (doi:10.1016/j.nbt.2018.03.003)
Montenegro, Juan D., Golicz, Agnieszka A., Bayer, Philipp E., Hurgobin, Bhavna, Lee, HueyTyng, Chan, Chon-Kit Kenneth, Muhindira, Paul, Lai, Kaitao, Doležel, Jaroslav, Batley, Jacqueline and Edwards, David (2017) The pangenome of hexaploid bread wheat. The Plant Journal, 90 (5). pp. 1007-1013. ISSN 0960-7412 (doi:10.1111/tpj.13515)
Staňková, Helena, Hastie, Alex R., Chan, Saki, Vrána, Jan, Tulpová, Zuzana, Kubaláková, Marie, Visendi, Paul, Hayashi, Satomi, Luo, Mingcheng, Batley, Jacqueline, Edwards, David, Doležel, Jaroslav and Šimková, Hana (2016) BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes. Plant Biotechnology Journal, 14 (7). pp. 1523-1531. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:10.1111/pbi.12513)
Visendi, Paul, Berkman, Paul J., Hayashi, Satomi, Golicz, Agnieszka A., Bayer, Philipp E., Ruperao, Pradeep, Hurgobin, Bhavna, Montenegro, Juan, Chan, Chon-Kit Kenneth, Staňková, Helena, Batley, Jacqueline, Šimková, Hana, Doležel, Jaroslav and Edwards, David (2016) An efficient approach to BAC based assembly of complex genomes. Plant Methods, 12 (2). pp. 1-9. ISSN 1746-4811 (Print), 1746-4811 (Online) (doi:10.1186/s13007-016-0107-9)
Gou, Lulu, Hattori, Jiro, Fedak, George, Balcerzak, Margaret, Sharpe, Andrew, Visendi, Paul, Edwards, David, Tinker, Nicholas, Wei, Yu-Ming, Chen, Guo-Yue and Ouellet, Thérèse (2015) Development and validation of –expressed molecular markers specific for the long arm of Chromosome 7E. Crop Science, 56 (1). pp. 354-363. ISSN 0011-183X (Print), 1435-0653 (Online) (doi:10.2135/cropsci2015.03.0184)
Lai, Kaitao, Lorenc, Michał T., Lee, Hong Ching, Berkman, Paul J., Bayer, Philipp Emanuel, Visendi, Paul, Ruperao, Pradeep, Fitzgerald, Timothy L., Zander, Manuel, Chan, Chon-Kit Kenneth, Manoli, Sahana, Stiller, Jiri, Batley, Jacqueline and Edwards, David (2015) Identification and characterization of more than 4 million intervarietal SNPs across the group 7 chromosomes of bread wheat. Plant Biotechnology Journal, 13 (1). pp. 97-104. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:10.1111/pbi.12240)
Bayer, Philipp E., Ruperao, Pradeep, Mason, Annaliese S., Stiller, Jiri, Chan, Chon-Kit Kenneth, Hayashi, Satomi, Long, Yan, Meng, Jinling, Sutton, Tim, Visendi, Paul, Varshney, Rajeev K., Batley, Jacqueline and Edwards, David (2015) High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus. Theoretical and Applied Genetics, 128 (6). pp. 1039-1047. ISSN 0040-5752 (Print), 1432-2242 (Online) (doi:10.1007/s00122-015-2488-y)
Golicz, Agnieszka A., Martinez, Paula A., Zander, Manuel, Patel, Dhwani A., Van De Wouw, Angela P., Visendi, Paul, Fitzgerald, Timothy L., Edwards, David and Batley, Jacqueline (2014) Gene loss in the fungal canola pathogen Leptosphaeria maculans. Functional & Integrative Genomics, 15 (2). pp. 189-196. ISSN 1438-793X (Print), 1438-7948 (Online) (doi:10.1007/s10142-014-0412-1)
Ruperao, Pradeep, Chan, Chon-Kit Kenneth, Azam, Sarwar, Karafiátová, Miroslava, Hayashi, Satomi, Čížková, Jana, Saxena, Rachit K., Šimková, Hana, Song, Chi, Vrána, Jan, Chitikineni, Annapurna, Visendi, Paul, Gaur, Pooran M., Millán, Teresa, Singh, Karam B., Taran, Bunyamin, Wang, Jun, Batley, Jacqueline, Doležel, Jaroslav, Varshney, Rajeev K. and Edwards, David (2014) A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies. Plant Biotechnology Journal, 12 (6). pp. 778-786. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:10.1111/pbi.12182)
Visendi, Paul, Batley, Jacqueline and Edwards, David (2013) Next generation characterisation of cereal genomes for marker discovery. Biology, 2 (4). pp. 1357-1377. ISSN 2079-7737 (Print), 2079-7737 (Online) (doi:10.3390/biology2041357)
Visendi, Paul, Batley, Jacqueline and Edwards, David (2013) Next generation sequencing and germplasm resources. Genomics of Plant Genetic Resources. Springer, Dordrecht, Holland, pp. 369-390. ISBN 978-9400775718 (doi:10.1007/978-94-007-7572-5_15)
Berkman, Paul J., Visendi, Paul, Lee, Hong C., Stiller, Jiri, Manoli, Sahana, Lorenc, Michał T., Lai, Kaitao, Batley, Jacqueline, Fleury, Delphine, Šimková, Hana, Kubaláková, Marie, Weining, Song, Doležel, Jaroslav and Edwards, David (2013) Dispersion and domestication shaped the genome of bread wheat. Plant Biotechnology Journal, 11 (5). pp. 564-571. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:10.1111/pbi.12044)
Lorenc, Michał T., Hayashi, Satomi, Stiller, Jiri, Lee, Hong, Manoli, Sahana, Ruperao, Pradeep, Visendi, Paul, Berkman, Paul J., Lai, Kaitao, Batley, Jacqueline and Edwards, David (2012) Discovery of single nucleotide polymorphisms in complex genomes using SGSautoSNP. Biology, 1 (3). pp. 370-382. ISSN 2079-7737 (Print), 2079-7737 (Online) (doi:10.3390/biology1020370)