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Items where Subject is "QR355 Virology"

Items where Subject is "QR355 Virology"

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(CMD) (EACMV) acceptability adolescents Africa African armyworm alata anopheles Anthrax toxin Antisense antiviral ART autoimmune disease bacilliform virus baculovirus badnavirus banana banana bunchy top virus banana-streak-virus Bangaladesh begomoviruses Bemisia tabaci Betaflexiviridae biogeography biological control biomedicine biotype body mass index Caribbean cassava Cassava brown streak disease cassava mosaic disease cassava mosaic virus cassava mosaic viruses cauliflower-mosaic-virus causal loop model Cell biology cellular receptor children competitive advantage coronavirus disease-2019 COVID-19 COVID-19 and tuberculosis COVID-19 lockdown Cytochrome oxidase days on mechanical ventilation death delayed enteral nutrition denaturing gradient gel electrophoresis (DGGE) Dioscorea spp. disease resistance diversity dna dna viruses dolichos yellow mosaic disease drug resistance drug-resistant tuberculosis dying early enteral nutrition East African cassava mosaic virus ELISA Endocytosis endogenous badnaviral elements endogenous retrovirus enteral nutrition environmental conditions expression feline aminopeptidase N gastrointestinal intolerance Geminiviridae geminivirus Geminivirus diversity genome genotype environment interaction Ghana glycated haemoglobin H5N1 health systems HERV high yield HIV HIV-TB horticulture Host choice host decoy trap Host-seeking vectors HTS Human blood index I gene immunity Indian Jatropha Mosaic Disease Indian subcontinent infection influenza IPM legume Leishmania length of hospital stay Leptospirosis linkage to care lipid parameters live SARS virus malaria vectors mathematical model mathematical modelling migratory pest modeling molecular genetics mortality mosaic-virus mosquito trap multiple sclerosis multiplex PCR neuraminidase inhibitor neutralizing titers next-generation sequencing Nipah virus non-suppression Non-viral nucleopolyhedrovirus nucleotide-sequence obstruction Onchocerca volvulus Onchocerciasis Ovipositing vectors paediatric tuberculosis parasite plug parenteral nutrition patients' perspective PEG-dilemma phylogenetics physiology plant disease plant pathogenic virus population genetics post-TB post-tuberculosis posthuman production constraints programmatic implementation programmatic management programmatic tuberculosis management promastigote pseudotype assay pseudotype virus pseudotypes public health changes PYMV Rabies reproduction number restriction retrotransposable elements retroviral pseudotypes rice RNA-Seq RNAi routine programmatic management routine reporting sand fly SARS-CoV-2 SARS-CoV-2 Delta variant secretory gel serology Simulium damnosum Simulium damnosum (sensu lato) siRNA Sjogren’s syndrome South Africa species demarcation spirometry Spodoptera exempta stomodeal valve Subling species sugarcane swollen shoot virus TB prevention TB-HIV technology timeline tomato transhumanism Transmission treatment outcomes tuberculosis tuberculosis meningitis tuberculosis mortality tuberculosis outcomes tuberculosis programmatic management tungro-associated viruses tungro-bacilliform virus type 2 diabetes type I feline coronaviruses Uganda vaccines Vector abundance vector transmission viral load viral neutralization viral release assay viral sequences virus detection virus research virus-specific primers West Africa whitefly yam yellow mottle virus Zoonoses Zoonotic disease
Number of items at this level: 243.

(CMD)

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

(EACMV)

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

acceptability

Purchase, Susan E., Garcia-Prats, Anthony J., De Koker, Petra, Draper, Heather R., Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Schaaf, H. Simon and Hesseling, Anneke C. (2019) Acceptability of a novel levofloxacin dispersible tablet formulation in young children exposed to multidrug-resistant tuberculosis. Pediatric Infectious Disease Journal, 38 (6). pp. 608-610. ISSN 0891-3668 (Print), 1532-0987 (Online) (doi:https://doi.org/10.1097/INF.0000000000002268)

adolescents

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

Africa

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

African armyworm

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

alata

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

anopheles

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

Anthrax toxin

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

Antisense

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

antiviral

Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

ART

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

autoimmune disease

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815, Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

bacilliform virus

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

baculovirus

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

badnavirus

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

banana

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

banana bunchy top virus

Lava Kumar, P., Ayodele, M., Oben, T.T., Mahungu, N.M., Beed, F., Coyne, D., Londa, L., Mutunda, M.P., Kiala, D. and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2009) First report of Banana bunchy top virus in banana and plantain (Musa spp.) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.01974.x)

banana-streak-virus

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

Bangaladesh

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Alam, S.N., Kader, K.A., Cork, Alan and Colvin, John (2006) A novel begomovirus with distinct genomic and phenotypic features infects tomato in Bangladesh. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01275.x)

begomoviruses

Aswatha Narayana, D.S., Rangaswamy, K.T., Shankarappa, K.S., Maruthi, M.N. ORCID: 0000-0002-8060-866X, Lakshminarayana Reddy, C.N., Rekha, A.R. and Keshava Murthy, K.V. (2007) Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease. International Journal of Virology, 3 (1). pp. 1-11. ISSN 1816-4900 (doi:https://doi.org/10.3923/ijv.2007.1.11)

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Alam, S.N., Kader, K.A., Cork, Alan and Colvin, John (2006) A novel begomovirus with distinct genomic and phenotypic features infects tomato in Bangladesh. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01275.x)

Bemisia tabaci

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

Betaflexiviridae

Silva, Gonçalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

biogeography

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)

biological control

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

biomedicine

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

biotype

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

body mass index

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

Caribbean

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001, Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

cassava

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

Cassava brown streak disease

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, Midatharahally Narasegowda ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

cassava mosaic disease

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, Midatharahally Narasegowda ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

cassava mosaic virus

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

cassava mosaic viruses

Aswatha Narayana, D.S., Rangaswamy, K.T., Shankarappa, K.S., Maruthi, M.N. ORCID: 0000-0002-8060-866X, Lakshminarayana Reddy, C.N., Rekha, A.R. and Keshava Murthy, K.V. (2007) Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease. International Journal of Virology, 3 (1). pp. 1-11. ISSN 1816-4900 (doi:https://doi.org/10.3923/ijv.2007.1.11)

cauliflower-mosaic-virus

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

causal loop model

Osman, Muhammad ORCID: 0000-0003-3818-9729, Karat, Aaron S, Khan, Munira, Meehan, Sue-Ann, von Delft, Arne, Brey, Zameer, Charalambous, Salome, Hesseling, Anneke C, Naidoo, Pren and Loveday, Marian (2021) Health system determinants of tuberculosis mortality in South Africa: a causal loop model. BMC Health Services Research, 21 (1):388. ISSN 1472-6963 (Online) (doi:https://doi.org/10.1186/s12913-021-06398-0)

Cell biology

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

cellular receptor

Dye, Charlotte, Temperton, Nigel ORCID: 0000-0002-7978-3815 and Siddell, Stuart G. (2007) Type I feline coronavirus spike glycoprotein fails to recognize aminopeptidase N as a functional receptor on feline cell lines. Journal of General Virology, 88 (6). pp. 1753-1760. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:https://doi.org/10.1099/vir.0.82666-0)

children

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

competitive advantage

Xia, Fan, Yang, Xinpei, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Xiao, Yanni (2021) Quantifying competitive advantages of mutant strains in a population involving importation and mass vaccination rollout. Infectious Disease Modelling, 6. pp. 988-996. ISSN 2468-0427 (doi:https://doi.org/10.1016/j.idm.2021.08.001)

coronavirus disease-2019

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

COVID-19

Davis, Jessica, Chinazzi, Matteo, Perra, Nicola ORCID: 0000-0002-5559-3064, Mu, Kunpeng, Pastore Y Piontti, Ana, Ajelli, Marco, Dean, Natalie, Gioannini, Corrado, Litvinova, Maria, Merler, Stefano, Rossi, Luca, Sun, Kaiyuan, Xiong, Xinyue, Longini, Ira Jr, Halloran, M. Elizabeth, Viboud, Cécile and Vespignani, Alessandro (2021) Cryptic transmission of SARS-CoV-2 and the first COVID-19 wave. Nature. ISSN 0028-0836 (Print), 1476-4687 (Online) (doi:https://doi.org/10.1038/s41586-021-04130-w)

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

Xia, Fan, Yang, Xinpei, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Xiao, Yanni (2021) Quantifying competitive advantages of mutant strains in a population involving importation and mass vaccination rollout. Infectious Disease Modelling, 6. pp. 988-996. ISSN 2468-0427 (doi:https://doi.org/10.1016/j.idm.2021.08.001)

COVID-19 and tuberculosis

Loveday, M, Cox, H, Evans, D, Furin, J, Ndjeka, N, Osman, Muhammad ORCID: 0000-0003-3818-9729 and Naidoo, K (2020) Opportunities from a new disease for an old threat: extending COVID-19 efforts to address tuberculosis in South Africa. South African Medical Journal, 110 (12). pp. 1160-1167. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2020.v110i12.15126)

COVID-19 lockdown

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

Cytochrome oxidase

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

days on mechanical ventilation

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

death

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

delayed enteral nutrition

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

denaturing gradient gel electrophoresis (DGGE)

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Dioscorea spp.

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

disease resistance

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, Midatharahally Narasegowda ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

diversity

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

dna

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

dna viruses

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

dolichos yellow mosaic disease

Maruthi, M.N ORCID: 0000-0002-8060-866X, Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) A distinct begomovirus causes Indian dolichos yellow mosaic disease. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01299.x)

drug resistance

Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

drug-resistant tuberculosis

Hughe, J. and Osman, Muhammad ORCID: 0000-0003-3818-9729 (2014) Diagnosis and management of drug-resistant tuberculosis in South African adults. South African Medical Journal, 104 (12). p. 894. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.9097)

Khan, Palwasha Y, Yates, Tom A, Osman, Muhammad ORCID: 0000-0003-3818-9729, Warren, Robin M, van der Heijden, Yuri, Padayatchi, Nesri, Nardell, Edward A, Moore, David, Mathema, Barun, Gandhi, Neel, Eldholm, Vegard, Dheda, Keertan, Hesseling, Anneke C, Mizrahi, Valerie, Rustomjee, Roxana and Pym, Alexander (2018) Transmission of drug-resistant tuberculosis in HIV-endemic settings. The Lancet Infectious Diseases, 19 (3). e77-e88. ISSN 1473-3099 (Print), 1474-4457 (Online) (doi:https://doi.org/10.1016/S1473-3099(18)30537-1)

Osman, Muhammad ORCID: 0000-0003-3818-9729, Harausz, Elizabeth P., Garcia-Prats, Anthony J., Schaaf, H. Simon, Moore, Brittany K., Hicks, Robert M., Achar, Jay, Amanullah, Farhana, Barry, Pennan, Becerra, Mercedes, Chiotan, Domnica I., Drobac, Peter C., Flood, Jennifer, Furin, Jennifer, Gegia, Medea, Isaakidis, Petros, Mariandyshev, Andrei, Ozere, Iveta, Shah, N. Sarita, Skrahina, Alena, Yablokova, Elena, Seddon, James A. and Hesseling, Anneke C. (2019) Treatment outcomes in global systematic review and patient meta-analysis of children with extensively drug-resistant tuberculosis. Emerging Infectious Diseases, 25 (3). pp. 441-450. ISSN 1080-6040 (Print), 1080-6059 (Online) (doi:https://doi.org/10.3201/eid2503.180852)

Purchase, Susan E., Garcia-Prats, Anthony J., De Koker, Petra, Draper, Heather R., Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Schaaf, H. Simon and Hesseling, Anneke C. (2019) Acceptability of a novel levofloxacin dispersible tablet formulation in young children exposed to multidrug-resistant tuberculosis. Pediatric Infectious Disease Journal, 38 (6). pp. 608-610. ISSN 0891-3668 (Print), 1532-0987 (Online) (doi:https://doi.org/10.1097/INF.0000000000002268)

Seddon, James A. ORCID: 0000-0002-2296-2302, Garcia-Prats, Anthony J., Purchase, Susan E., Osman, Muhammad ORCID: 0000-0003-3818-9729, Demers, Anne-Marie, Hoddinott, Graeme, Crook, Angela M., Owen-Powell, Ellen, Thomason, Margaret J., Turkova, Anna, Gibb, Diana M., Fairlie, Lee, Martinson, Neil, Schaaf, H. Simon and Hesseling, Anneke C. (2018) Levofloxacin versus placebo for the prevention of tuberculosis disease in child contacts of multidrug-resistant tuberculosis: study protocol for a phase III cluster randomised controlled trial (TB-CHAMP). Trials, 19 (1):693. ISSN 1745-6215 (Online) (doi:https://doi.org/10.1186/s13063-018-3070-0)

dying

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

early enteral nutrition

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

East African cassava mosaic virus

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

ELISA

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

Endocytosis

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

endogenous badnaviral elements

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

endogenous retrovirus

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815, Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

enteral nutrition

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

environmental conditions

Stettler, Marc E. J., Nishida, Robert T., de Oliveira, Pedro M., Mesquita, Léo C. C., Johnson, Tyler J., Galea, Edwin ORCID: 0000-0002-0001-6665, Grandison, Angus, Ewer, John ORCID: 0000-0003-0609-272X, Carruthers-Jones, David, Sykes, David, Kumar, Prashant, Avital, Eldad, Obeysekara, Asiri I. B., Doorly, Denis, Hardalupas, Yannis, Green, David C., Coldrick, Simon, Parker, Simon and Boies, Adam M. (2022) Source terms for benchmarking models of SARS-CoV-2 transmission via aerosols and droplets. Royal Society Open Science, 9 (5):212022. ISSN 2054-5703 (Online) (doi:https://doi.org/10.1098/rsos.212022)

expression

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

feline aminopeptidase N

Dye, Charlotte, Temperton, Nigel ORCID: 0000-0002-7978-3815 and Siddell, Stuart G. (2007) Type I feline coronavirus spike glycoprotein fails to recognize aminopeptidase N as a functional receptor on feline cell lines. Journal of General Virology, 88 (6). pp. 1753-1760. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:https://doi.org/10.1099/vir.0.82666-0)

gastrointestinal intolerance

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

Geminiviridae

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

geminivirus

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001, Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

Geminivirus diversity

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

genome

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

genotype environment interaction

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, Midatharahally Narasegowda ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

Ghana

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

glycated haemoglobin

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

H5N1

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Hoschler, Katja, Major, Diane, Nicolson, Carolyn, Manvell, Ruth, Hien, Vo Minh, Ha, Do Quang, de Jong, Menno, Zambon, Maria, Takeuchi, Yasuhiro and Weiss, Robin A. (2007) A sensitive retroviral pseudotype assay for influenza H5N1-neutralizing antibodies. Influenza and other respiratory viruses, 1 (3). pp. 105-112. ISSN 1750-2659 (online) (doi:https://doi.org/10.1111/j.1750-2659.2007.00016.x)

health systems

Osman, Muhammad ORCID: 0000-0003-3818-9729, Karat, Aaron S, Khan, Munira, Meehan, Sue-Ann, von Delft, Arne, Brey, Zameer, Charalambous, Salome, Hesseling, Anneke C, Naidoo, Pren and Loveday, Marian (2021) Health system determinants of tuberculosis mortality in South Africa: a causal loop model. BMC Health Services Research, 21 (1):388. ISSN 1472-6963 (Online) (doi:https://doi.org/10.1186/s12913-021-06398-0)

HERV

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815, Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

high yield

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, Midatharahally Narasegowda ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

HIV

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

HIV-TB

Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Dunbar, Rory, Draper, Heather R., Lombard, Carl and Beyers, Nulda (2015) The complex relationship between human immunodeficiency virus infection and death in adults being treated for tuberculosis in Cape Town, South Africa. BMC Public Health, 15 (1):556. ISSN 1471-2458 (Online) (doi:https://doi.org/10.1186/s12889-015-1914-z)

horticulture

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)

Host choice

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

host decoy trap

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

Host-seeking vectors

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

HTS

Silva, Gonçalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

Human blood index

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

I gene

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

immunity

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

Indian Jatropha Mosaic Disease

Aswatha Narayana, D.S., Rangaswamy, K.T., Shankarappa, K.S., Maruthi, M.N. ORCID: 0000-0002-8060-866X, Lakshminarayana Reddy, C.N., Rekha, A.R. and Keshava Murthy, K.V. (2007) Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease. International Journal of Virology, 3 (1). pp. 1-11. ISSN 1816-4900 (doi:https://doi.org/10.3923/ijv.2007.1.11)

Indian subcontinent

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

infection

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

influenza

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Hoschler, Katja, Major, Diane, Nicolson, Carolyn, Manvell, Ruth, Hien, Vo Minh, Ha, Do Quang, de Jong, Menno, Zambon, Maria, Takeuchi, Yasuhiro and Weiss, Robin A. (2007) A sensitive retroviral pseudotype assay for influenza H5N1-neutralizing antibodies. Influenza and other respiratory viruses, 1 (3). pp. 105-112. ISSN 1750-2659 (online) (doi:https://doi.org/10.1111/j.1750-2659.2007.00016.x)

IPM

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

legume

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

Leishmania

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

length of hospital stay

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

Leptospirosis

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

linkage to care

Vanqa, Nosivuyile, Hoddinott, Graeme, Mbenyana, Baxolele, Osman, Muhammad ORCID: 0000-0003-3818-9729 and Meehan, Sue-Ann (2021) Linkage to TB care: a qualitative study to understand linkage from the patients' perspective in the Western Cape Province, South Africa. PloS one, 16 (11):e0260200. ISSN 1932-6203 (Online) (doi:https://doi.org/10.1371/journal.pone.0260200)

lipid parameters

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

live SARS virus

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

malaria vectors

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

mathematical model

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001, Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

mathematical modelling

Dodd, Peter J. ORCID: 0000-0001-5825-9347, Osman, Muhammad ORCID: 0000-0003-3818-9729, Cresswell, Fiona V. ORCID: 0000-0002-5070-532X, Stadelman, Anna M., Lan, Nguyen Huu, Thuong, Nguyen Thuy Thuong ORCID: 0000-0001-8733-692X, Muzyamba, Morris ORCID: 0000-0001-8442-4481, Glaser, Lisa ORCID: 0000-0002-8715-9799, Dlamini, Sicelo S. and Seddon, James A. ORCID: 0000-0002-2296-2302 (2021) The global burden of tuberculous meningitis in adults: a modelling study. PLOS Global Public Health, 1 (12):e0000069. ISSN 2767-3375 (Online) (doi:https://doi.org/10.1371/journal.pgph.0000069)

migratory pest

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

modeling

Davis, Jessica, Chinazzi, Matteo, Perra, Nicola ORCID: 0000-0002-5559-3064, Mu, Kunpeng, Pastore Y Piontti, Ana, Ajelli, Marco, Dean, Natalie, Gioannini, Corrado, Litvinova, Maria, Merler, Stefano, Rossi, Luca, Sun, Kaiyuan, Xiong, Xinyue, Longini, Ira Jr, Halloran, M. Elizabeth, Viboud, Cécile and Vespignani, Alessandro (2021) Cryptic transmission of SARS-CoV-2 and the first COVID-19 wave. Nature. ISSN 0028-0836 (Print), 1476-4687 (Online) (doi:https://doi.org/10.1038/s41586-021-04130-w)

molecular genetics

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)

mortality

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, Karen, Seddon, James A., Claassens, Mareli M., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Naidoo, Pren and Hesseling, Anneke C. (2021) Mortality in South African children and adolescents routinely treated for tuberculosis. Pediatrics, 147 (4):e2020032490. ISSN 0031-4005 (Print), 1098-4275 (Online) (doi:https://doi.org/10.1542/peds.2020-032490)

mosaic-virus

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

mosquito trap

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

multiple sclerosis

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815, Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

multiplex PCR

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

neuraminidase inhibitor

Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

neutralizing titers

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

next-generation sequencing

Silva, Gonçalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

Nipah virus

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

non-suppression

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

Non-viral

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

nucleopolyhedrovirus

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

nucleotide-sequence

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

obstruction

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

Onchocerca volvulus

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

Onchocerciasis

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

Ovipositing vectors

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

paediatric tuberculosis

Osman, Muhammad ORCID: 0000-0003-3818-9729, Harausz, Elizabeth P., Garcia-Prats, Anthony J., Schaaf, H. Simon, Moore, Brittany K., Hicks, Robert M., Achar, Jay, Amanullah, Farhana, Barry, Pennan, Becerra, Mercedes, Chiotan, Domnica I., Drobac, Peter C., Flood, Jennifer, Furin, Jennifer, Gegia, Medea, Isaakidis, Petros, Mariandyshev, Andrei, Ozere, Iveta, Shah, N. Sarita, Skrahina, Alena, Yablokova, Elena, Seddon, James A. and Hesseling, Anneke C. (2019) Treatment outcomes in global systematic review and patient meta-analysis of children with extensively drug-resistant tuberculosis. Emerging Infectious Diseases, 25 (3). pp. 441-450. ISSN 1080-6040 (Print), 1080-6059 (Online) (doi:https://doi.org/10.3201/eid2503.180852)

Osman, Muhammad ORCID: 0000-0003-3818-9729, Lee, Kevin, Du Preez, Karen, Dunbar, Rory, Hesseling, Anneke C and Seddon, James A (2017) Excellent treatment outcomes in children treated for tuberculosis under routine operational conditions in Cape Town, South Africa. Clinical Infectious Diseases, 65 (9). pp. 1444-1452. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/cix602)

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, Karen, Seddon, James A., Claassens, Mareli M., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Naidoo, Pren and Hesseling, Anneke C. (2021) Mortality in South African children and adolescents routinely treated for tuberculosis. Pediatrics, 147 (4):e2020032490. ISSN 0031-4005 (Print), 1098-4275 (Online) (doi:https://doi.org/10.1542/peds.2020-032490)

Seddon, James A, Whittaker, Elizabeth, Kampmann, Beate, Lewinsohn, Deborah A, Osman, Muhammad ORCID: 0000-0003-3818-9729, Hesseling, Anneke C, Rustomjee, Roxana and Amanullah, Farhana (2018) The evolving research agenda for paediatric tuberculosis infection. The Lancet Infectious Diseases, 19 (9). e322-e329. ISSN 1473-3099 (Print), 1474-4457 (Online) (doi:https://doi.org/10.1016/S1473-3099(18)30787-4)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

parasite plug

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

parenteral nutrition

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X, Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

patients' perspective

Vanqa, Nosivuyile, Hoddinott, Graeme, Mbenyana, Baxolele, Osman, Muhammad ORCID: 0000-0003-3818-9729 and Meehan, Sue-Ann (2021) Linkage to TB care: a qualitative study to understand linkage from the patients' perspective in the Western Cape Province, South Africa. PloS one, 16 (11):e0260200. ISSN 1932-6203 (Online) (doi:https://doi.org/10.1371/journal.pone.0260200)

PEG-dilemma

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

phylogenetics

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

physiology

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

plant disease

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001, Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

plant pathogenic virus

Kubiriba, Jerome (2005) Epidemiology of Banana streak virus (BSV) in East African highland bananas (AAA-EA). PhD thesis, University of Greenwich.

population genetics

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

post-TB

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

post-tuberculosis

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

Osman, Muhammad ORCID: 0000-0003-3818-9729, Welte, Alex, Dunbar, Rory, Brown, Rosemary, Hoddinott, Graeme, Hesseling, Anneke C. and Marx, Florian M. (2019) Morbidity and mortality up to 5 years post tuberculosis treatment in South Africa: a pilot study. International Journal of Infectious Diseases, 85. pp. 57-63. ISSN 1201-9712 (doi:https://doi.org/10.1016/j.ijid.2019.05.024)

posthuman

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

production constraints

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

programmatic implementation

Osman, Muhammad ORCID: 0000-0003-3818-9729, Lee, Kevin, Du Preez, Karen, Dunbar, Rory, Hesseling, Anneke C and Seddon, James A (2017) Excellent treatment outcomes in children treated for tuberculosis under routine operational conditions in Cape Town, South Africa. Clinical Infectious Diseases, 65 (9). pp. 1444-1452. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/cix602)

programmatic management

Hughe, J. and Osman, Muhammad ORCID: 0000-0003-3818-9729 (2014) Diagnosis and management of drug-resistant tuberculosis in South African adults. South African Medical Journal, 104 (12). p. 894. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.9097)

programmatic tuberculosis management

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

promastigote

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

pseudotype assay

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

pseudotype virus

Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

pseudotypes

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Hoschler, Katja, Major, Diane, Nicolson, Carolyn, Manvell, Ruth, Hien, Vo Minh, Ha, Do Quang, de Jong, Menno, Zambon, Maria, Takeuchi, Yasuhiro and Weiss, Robin A. (2007) A sensitive retroviral pseudotype assay for influenza H5N1-neutralizing antibodies. Influenza and other respiratory viruses, 1 (3). pp. 105-112. ISSN 1750-2659 (online) (doi:https://doi.org/10.1111/j.1750-2659.2007.00016.x)

public health changes

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, K., Naidoo, P., Bock, P., Rabie, H., Dlamini, S. S. and Hesseling, A. C. (2020) Key changes in the public health response to TB and HIV in South Africa. The International Journal of Tuberculosis and Lung Disease, 24 (8). pp. 857-859. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0147)

PYMV

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001, Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

Rabies

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

reproduction number

Xia, Fan, Yang, Xinpei, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Xiao, Yanni (2021) Quantifying competitive advantages of mutant strains in a population involving importation and mass vaccination rollout. Infectious Disease Modelling, 6. pp. 988-996. ISSN 2468-0427 (doi:https://doi.org/10.1016/j.idm.2021.08.001)

restriction

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

retrotransposable elements

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

retroviral pseudotypes

Dye, Charlotte, Temperton, Nigel ORCID: 0000-0002-7978-3815 and Siddell, Stuart G. (2007) Type I feline coronavirus spike glycoprotein fails to recognize aminopeptidase N as a functional receptor on feline cell lines. Journal of General Virology, 88 (6). pp. 1753-1760. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:https://doi.org/10.1099/vir.0.82666-0)

rice

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

RNA-Seq

Silva, Gonçalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

RNAi

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

routine programmatic management

Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Dunbar, Rory, Draper, Heather R., Lombard, Carl and Beyers, Nulda (2015) The complex relationship between human immunodeficiency virus infection and death in adults being treated for tuberculosis in Cape Town, South Africa. BMC Public Health, 15 (1):556. ISSN 1471-2458 (Online) (doi:https://doi.org/10.1186/s12889-015-1914-z)

routine reporting

Osman, Muhammad ORCID: 0000-0003-3818-9729, Welte, A, Naidoo, P, Loveday, M and Hesseling, AC (2020) Limitations and potential bias in vital registration data and tuberculosis mortality reporting in South Africa. South African Medical Journal, 110 (7). pp. 607-609. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2020.v110i7.14533)

sand fly

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

SARS-CoV-2

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

Stettler, Marc E. J., Nishida, Robert T., de Oliveira, Pedro M., Mesquita, Léo C. C., Johnson, Tyler J., Galea, Edwin ORCID: 0000-0002-0001-6665, Grandison, Angus, Ewer, John ORCID: 0000-0003-0609-272X, Carruthers-Jones, David, Sykes, David, Kumar, Prashant, Avital, Eldad, Obeysekara, Asiri I. B., Doorly, Denis, Hardalupas, Yannis, Green, David C., Coldrick, Simon, Parker, Simon and Boies, Adam M. (2022) Source terms for benchmarking models of SARS-CoV-2 transmission via aerosols and droplets. Royal Society Open Science, 9 (5):212022. ISSN 2054-5703 (Online) (doi:https://doi.org/10.1098/rsos.212022)

SARS-CoV-2 Delta variant

Xia, Fan, Yang, Xinpei, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Xiao, Yanni (2021) Quantifying competitive advantages of mutant strains in a population involving importation and mass vaccination rollout. Infectious Disease Modelling, 6. pp. 988-996. ISSN 2468-0427 (doi:https://doi.org/10.1016/j.idm.2021.08.001)

secretory gel

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

serology

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Hoschler, Katja, Major, Diane, Nicolson, Carolyn, Manvell, Ruth, Hien, Vo Minh, Ha, Do Quang, de Jong, Menno, Zambon, Maria, Takeuchi, Yasuhiro and Weiss, Robin A. (2007) A sensitive retroviral pseudotype assay for influenza H5N1-neutralizing antibodies. Influenza and other respiratory viruses, 1 (3). pp. 105-112. ISSN 1750-2659 (online) (doi:https://doi.org/10.1111/j.1750-2659.2007.00016.x)

Simulium damnosum

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

Simulium damnosum (sensu lato)

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

siRNA

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

Sjogren’s syndrome

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815, Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

South Africa

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

species demarcation

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

spirometry

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729, Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

Spodoptera exempta

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

stomodeal valve

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

Subling species

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

sugarcane

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

swollen shoot virus

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

TB prevention

Purchase, Susan E., Garcia-Prats, Anthony J., De Koker, Petra, Draper, Heather R., Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Schaaf, H. Simon and Hesseling, Anneke C. (2019) Acceptability of a novel levofloxacin dispersible tablet formulation in young children exposed to multidrug-resistant tuberculosis. Pediatric Infectious Disease Journal, 38 (6). pp. 608-610. ISSN 0891-3668 (Print), 1532-0987 (Online) (doi:https://doi.org/10.1097/INF.0000000000002268)

Seddon, James A. ORCID: 0000-0002-2296-2302, Garcia-Prats, Anthony J., Purchase, Susan E., Osman, Muhammad ORCID: 0000-0003-3818-9729, Demers, Anne-Marie, Hoddinott, Graeme, Crook, Angela M., Owen-Powell, Ellen, Thomason, Margaret J., Turkova, Anna, Gibb, Diana M., Fairlie, Lee, Martinson, Neil, Schaaf, H. Simon and Hesseling, Anneke C. (2018) Levofloxacin versus placebo for the prevention of tuberculosis disease in child contacts of multidrug-resistant tuberculosis: study protocol for a phase III cluster randomised controlled trial (TB-CHAMP). Trials, 19 (1):693. ISSN 1745-6215 (Online) (doi:https://doi.org/10.1186/s13063-018-3070-0)

TB-HIV

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, K., Naidoo, P., Bock, P., Rabie, H., Dlamini, S. S. and Hesseling, A. C. (2020) Key changes in the public health response to TB and HIV in South Africa. The International Journal of Tuberculosis and Lung Disease, 24 (8). pp. 857-859. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0147)

Sloot, R, Maarman, G J, Osman, Muhammad ORCID: 0000-0003-3818-9729 and Marx, F M (2018) Variation in HIV prevalence and the population-level effects of antiretroviral therapy in reducing tuberculosis incidence in South Africa. South African Medical Journal, 108 (8). p. 606. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2018.v108i8.13394)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

technology

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

timeline

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, K., Naidoo, P., Bock, P., Rabie, H., Dlamini, S. S. and Hesseling, A. C. (2020) Key changes in the public health response to TB and HIV in South Africa. The International Journal of Tuberculosis and Lung Disease, 24 (8). pp. 857-859. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0147)

tomato

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Alam, S.N., Kader, K.A., Cork, Alan and Colvin, John (2006) A novel begomovirus with distinct genomic and phenotypic features infects tomato in Bangladesh. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01275.x)

transhumanism

Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge, London. ISBN 978-0367542177 (In Press)

Transmission

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

Stettler, Marc E. J., Nishida, Robert T., de Oliveira, Pedro M., Mesquita, Léo C. C., Johnson, Tyler J., Galea, Edwin ORCID: 0000-0002-0001-6665, Grandison, Angus, Ewer, John ORCID: 0000-0003-0609-272X, Carruthers-Jones, David, Sykes, David, Kumar, Prashant, Avital, Eldad, Obeysekara, Asiri I. B., Doorly, Denis, Hardalupas, Yannis, Green, David C., Coldrick, Simon, Parker, Simon and Boies, Adam M. (2022) Source terms for benchmarking models of SARS-CoV-2 transmission via aerosols and droplets. Royal Society Open Science, 9 (5):212022. ISSN 2054-5703 (Online) (doi:https://doi.org/10.1098/rsos.212022)

treatment outcomes

Osman, Muhammad ORCID: 0000-0003-3818-9729, Lee, Kevin, Du Preez, Karen, Dunbar, Rory, Hesseling, Anneke C and Seddon, James A (2017) Excellent treatment outcomes in children treated for tuberculosis under routine operational conditions in Cape Town, South Africa. Clinical Infectious Diseases, 65 (9). pp. 1444-1452. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/cix602)

tuberculosis

Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A., Dunbar, Rory, Draper, Heather R., Lombard, Carl and Beyers, Nulda (2015) The complex relationship between human immunodeficiency virus infection and death in adults being treated for tuberculosis in Cape Town, South Africa. BMC Public Health, 15 (1):556. ISSN 1471-2458 (Online) (doi:https://doi.org/10.1186/s12889-015-1914-z)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729, Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

tuberculosis meningitis

Dodd, Peter J. ORCID: 0000-0001-5825-9347, Osman, Muhammad ORCID: 0000-0003-3818-9729, Cresswell, Fiona V. ORCID: 0000-0002-5070-532X, Stadelman, Anna M., Lan, Nguyen Huu, Thuong, Nguyen Thuy Thuong ORCID: 0000-0001-8733-692X, Muzyamba, Morris ORCID: 0000-0001-8442-4481, Glaser, Lisa ORCID: 0000-0002-8715-9799, Dlamini, Sicelo S. and Seddon, James A. ORCID: 0000-0002-2296-2302 (2021) The global burden of tuberculous meningitis in adults: a modelling study. PLOS Global Public Health, 1 (12):e0000069. ISSN 2767-3375 (Online) (doi:https://doi.org/10.1371/journal.pgph.0000069)

tuberculosis mortality

Osman, Muhammad ORCID: 0000-0003-3818-9729, Karat, Aaron S, Khan, Munira, Meehan, Sue-Ann, von Delft, Arne, Brey, Zameer, Charalambous, Salome, Hesseling, Anneke C, Naidoo, Pren and Loveday, Marian (2021) Health system determinants of tuberculosis mortality in South Africa: a causal loop model. BMC Health Services Research, 21 (1):388. ISSN 1472-6963 (Online) (doi:https://doi.org/10.1186/s12913-021-06398-0)

Osman, Muhammad ORCID: 0000-0003-3818-9729, Verster, Janette, Dempers, Johan J, Du Preez, Karen, von Delft, Arne, Dunbar, Rory, Welte, Alex, Naidoo, Pren and Hesseling, Anneke C (2021) Tuberculosis in persons with sudden unexpected death, in Cape Town, South Africa. International Journal of Infectious Diseases, 105. pp. 75-82. ISSN 1201-9712 (doi:https://doi.org/10.1016/j.ijid.2021.02.036)

Osman, Muhammad ORCID: 0000-0003-3818-9729, Welte, A, Naidoo, P, Loveday, M and Hesseling, AC (2020) Limitations and potential bias in vital registration data and tuberculosis mortality reporting in South Africa. South African Medical Journal, 110 (7). pp. 607-609. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2020.v110i7.14533)

Osman, Muhammad ORCID: 0000-0003-3818-9729, van Schalkwyk, Cari, Naidoo, Pren, Seddon, James A., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Hesseling, Anneke C. and Claassens, Mareli M. (2021) Mortality during tuberculosis treatment in South Africa using an 8-year analysis of the national tuberculosis treatment register. Scientific Reports, 11 (1):15894. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-021-95331-w)

tuberculosis outcomes

Osman, Muhammad ORCID: 0000-0003-3818-9729, Harausz, Elizabeth P., Garcia-Prats, Anthony J., Schaaf, H. Simon, Moore, Brittany K., Hicks, Robert M., Achar, Jay, Amanullah, Farhana, Barry, Pennan, Becerra, Mercedes, Chiotan, Domnica I., Drobac, Peter C., Flood, Jennifer, Furin, Jennifer, Gegia, Medea, Isaakidis, Petros, Mariandyshev, Andrei, Ozere, Iveta, Shah, N. Sarita, Skrahina, Alena, Yablokova, Elena, Seddon, James A. and Hesseling, Anneke C. (2019) Treatment outcomes in global systematic review and patient meta-analysis of children with extensively drug-resistant tuberculosis. Emerging Infectious Diseases, 25 (3). pp. 441-450. ISSN 1080-6040 (Print), 1080-6059 (Online) (doi:https://doi.org/10.3201/eid2503.180852)

Osman, Muhammad ORCID: 0000-0003-3818-9729, du Preez, Karen, Seddon, James A., Claassens, Mareli M., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Naidoo, Pren and Hesseling, Anneke C. (2021) Mortality in South African children and adolescents routinely treated for tuberculosis. Pediatrics, 147 (4):e2020032490. ISSN 0031-4005 (Print), 1098-4275 (Online) (doi:https://doi.org/10.1542/peds.2020-032490)

tuberculosis programmatic management

Osman, Muhammad ORCID: 0000-0003-3818-9729, van Schalkwyk, Cari, Naidoo, Pren, Seddon, James A., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Hesseling, Anneke C. and Claassens, Mareli M. (2021) Mortality during tuberculosis treatment in South Africa using an 8-year analysis of the national tuberculosis treatment register. Scientific Reports, 11 (1):15894. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-021-95331-w)

tungro-associated viruses

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

tungro-bacilliform virus

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

type 2 diabetes

Ojo, Omorogieva ORCID: 0000-0003-0071-3652, Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350, Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

type I feline coronaviruses

Dye, Charlotte, Temperton, Nigel ORCID: 0000-0002-7978-3815 and Siddell, Stuart G. (2007) Type I feline coronavirus spike glycoprotein fails to recognize aminopeptidase N as a functional receptor on feline cell lines. Journal of General Virology, 88 (6). pp. 1753-1760. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:https://doi.org/10.1099/vir.0.82666-0)

Uganda

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

vaccines

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Chan, Paul K., Simmons, Graham, Zambon, Maria C., Tedder, Richard S., Takeuchi, Yasuhiro and Weiss, Robin A. (2005) Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes. Emerging Infectious Diseases, 11 (3). pp. 411-416. ISSN 1080-6059 (doi:https://doi.org/10.3201/eid1103.040906)

Vector abundance

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934, Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

vector transmission

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

viral load

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131, Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

viral neutralization

Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Hoschler, Katja, Major, Diane, Nicolson, Carolyn, Manvell, Ruth, Hien, Vo Minh, Ha, Do Quang, de Jong, Menno, Zambon, Maria, Takeuchi, Yasuhiro and Weiss, Robin A. (2007) A sensitive retroviral pseudotype assay for influenza H5N1-neutralizing antibodies. Influenza and other respiratory viruses, 1 (3). pp. 105-112. ISSN 1750-2659 (online) (doi:https://doi.org/10.1111/j.1750-2659.2007.00016.x)

viral release assay

Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815, Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

viral sequences

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

virus detection

Silva, Gonçalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

virus research

Kubiriba, Jerome (2005) Epidemiology of Banana streak virus (BSV) in East African highland bananas (AAA-EA). PhD thesis, University of Greenwich.

virus-specific primers

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

West Africa

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

whitefly

Maruthi, M.N. ORCID: 0000-0002-8060-866X, Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

yam

Silva, Goncalo ORCID: 0000-0001-5544-2947, Bömer, Moritz ORCID: 0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

yellow mottle virus

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

Zoonoses

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

Zoonotic disease

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

This list was generated on Wed Aug 10 02:52:11 2022 UTC.