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Items where Subject is "QR355 Virology"

Items where Subject is "QR355 Virology"

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Number of items at this level: 91.

A

Allwood, B. W., Stolbrink, M., Baines, N., Louw, E., Wademan, D. T., Lupton-Smith, A., Nel, S., Maree, D., Mpagama, S., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Marx, F. M., Hoddinott, G., Lesosky, M., Rylance, J. and Mortimer, K. (2021) Persistent chronic respiratory symptoms despite TB cure is poorly correlated with lung function. The International Journal of Tuberculosis and Lung Disease, 25 (4):9. pp. 262-270. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0906)

Alquicer, Glenda, Ibrahim, Emad, Maruthi, M.N. ORCID: 0000-0002-8060-866X and Kundu, Jiban Kumar (2023) Identifying putative resistance genes for barley yellow dwarf virus‐PAV in wheat and barley. Viruses, 15:716. pp. 1-25. ISSN 1999-4915 (Online) (doi:https://doi.org/10.3390/v15030716)

Aswatha Narayana, D.S., Rangaswamy, K.T., Shankarappa, K.S., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Lakshminarayana Reddy, C.N., Rekha, A.R. and Keshava Murthy, K.V. (2007) Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease. International Journal of Virology, 3 (1). pp. 1-11. ISSN 1816-4900 (doi:https://doi.org/10.3923/ijv.2007.1.11)

B

Bettridge, Judy ORCID: 0000-0002-3917-4660 , Snow, L. C., Tang, Y., Petrovska, L. ORCID: 0000-0003-2638-5052 , Lawes, J. and Smith, R. P. ORCID: 0000-0001-6871-4673 (2023) Using SNP addresses for Salmonella Typhimurium DT104 in routine veterinary outbreak detection. Epidemiology and Infection, 151:e187. pp. 1-14. ISSN 0950-2688 (Print), 1469-4409 (Online) (doi:https://doi.org/10.1017/S0950268823001723)

Bousalem, M., Douzery, E.J.P. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Taxonomy, molecular phylogeny and evolution of plant reverse transcribing viruses (family Caulimoviridae) inferred from full-length genome and reverse transcriptase sequences. Archives of Virology, 153 (6). pp. 1085-1102. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0095-9)

C

Chao, Yi-Sheng, Wu, Chao-Jung, Po, June ORCID: 0000-0001-6124-8235 , Huang, Shih-Yu, Wu, Hsing-Chien, Hsu, Hui-Ting, Cheng, Yen-Po, Lai, Yi-Chun and Chen, Wei-Chih (2023) The upper limits of risk ratios and recommendations for reporting risk ratios, odds ratios, and rate ratios. Cureus Journal of Medical Sciences, 15 (4):e37799. pp. 1-22. ISSN 2168-8184 (doi:https://doi.org/10.7759/cureus.37799)

Cheng, Qu, Liu, Yan, Wang, Xia, Tang, Sanyi and Cheke, Robert ORCID: 0000-0002-7437-1934 (2023) The relative importance of key meteorological factors affecting numbers of mosquito vectors of dengue fever. PLoS Neglected Tropical Diseases, 17 (4):e0011247. pp. 1-21. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0011247)

D

Davis, Jessica, Chinazzi, Matteo, Perra, Nicola ORCID: 0000-0002-5559-3064 , Mu, Kunpeng, Pastore Y Piontti, Ana, Ajelli, Marco, Dean, Natalie, Gioannini, Corrado, Litvinova, Maria, Merler, Stefano, Rossi, Luca, Sun, Kaiyuan, Xiong, Xinyue, Longini, Ira Jr, Halloran, M. Elizabeth, Viboud, Cécile and Vespignani, Alessandro (2021) Cryptic transmission of SARS-CoV-2 and the first COVID-19 wave. Nature. ISSN 0028-0836 (Print), 1476-4687 (Online) (doi:https://doi.org/10.1038/s41586-021-04130-w)

Di Bari, Carlotta, Venkateswaran, Narmada, Fastl, Christina, Gabriël, Sarah, Grace, Delia ORCID: 0000-0002-0195-9489 , Havelaar, Arie H., Huntington, Ben, Patterson, Grace T., Rushton, Jonathan, Speybroeck, Niko, Torgerson, Paul, Pigott, David M. and Devleesschauwer, Brecht (2023) The global burden of neglected zoonotic diseases: current state of evidence. One Health, 17:100595. pp. 1-8. ISSN 2352-7714 (Online) (doi:https://doi.org/10.1016/j.onehlt.2023.100595)

Dodd, Peter J. ORCID: 0000-0001-5825-9347 , Osman, Muhammad ORCID: 0000-0003-3818-9729 , Cresswell, Fiona V. ORCID: 0000-0002-5070-532X , Stadelman, Anna M., Lan, Nguyen Huu, Thuong, Nguyen Thuy Thuong ORCID: 0000-0001-8733-692X , Muzyamba, Morris ORCID: 0000-0001-8442-4481 , Glaser, Lisa ORCID: 0000-0002-8715-9799 , Dlamini, Sicelo S. and Seddon, James A. ORCID: 0000-0002-2296-2302 (2021) The global burden of tuberculous meningitis in adults: a modelling study. PLOS Global Public Health, 1 (12):e0000069. ISSN 2767-3375 (Online) (doi:https://doi.org/10.1371/journal.pgph.0000069)

Dogra, Alma Elina Kaur, Munyasa, Winnan Lucia, Nguyen-Viet, Hung and Grace, Delia ORCID: 0000-0002-0195-9489 (2023) Looking in all the wrong places: a rationale for signal detection for pandemics based on existing data sources. IJID One Health:100003. ISSN 2949-9151 (doi:https://doi.org/10.1016/j.ijidoh.2023.100003)

Dunham, M., Bacon, L., Cottom, S., McCrone, P., Mehrpouya, H., Spyridonis, F., Thompson, Trevor ORCID: 0000-0001-9880-782X and Schofield, P. (2022) Chronic pain through COVID. Frontiers in Pain Research, 3:937652. pp. 1-10. ISSN 2673-561X (Online) (doi:https://doi.org/10.3389/fpain.2022.937652)

Durrance-Bagale, Anna, Rudge, James W., Singh, Nanda Bahadur, Belmain, Steven R. ORCID: 0000-0002-5590-7545 and Howard, Natasha (2021) Drivers of zoonotic disease risk in the Indian subcontinent: a scoping review. One Health, 13:100310. ISSN 2352-7714 (doi:https://doi.org/10.1016/j.onehlt.2021.100310)

Dye, Charlotte, Temperton, Nigel ORCID: 0000-0002-7978-3815 and Siddell, Stuart G. (2007) Type I feline coronavirus spike glycoprotein fails to recognize aminopeptidase N as a functional receptor on feline cell lines. Journal of General Virology, 88 (6). pp. 1753-1760. ISSN 0022-1317 (Print), 1465-2099 (Online) (doi:https://doi.org/10.1099/vir.0.82666-0)

Dyer, Paul D.R., Shepherd, Thomas R., Gollings, Alexander S., Shorter, Susan A., Gorringe-Pattrick, Monique A. M., Tang, Chun-Kit, Cattoz, Beatrice N., Baillie, Les, Griffiths, Peter C. ORCID: 0000-0002-6686-1271 and Richardson, Simon C.W. ORCID: 0000-0002-7927-0649 (2015) Disarmed anthrax toxin delivers antisense oligonucleotides and siRNA with high efficiency and low toxicity. Journal of Controlled Release, 220 (A). pp. 316-328. ISSN 0168-3659 (doi:https://doi.org/10.1016/j.jconrel.2015.10.054)

du Preez, Karen, Osman, Muhammad ORCID: 0000-0003-3818-9729 , Seddon, James A, Naidoo, Pren, Schaaf, H Simon, Munch, Zahn, Dunbar, Rory, Mvusi, Lindiwe, Dlamini, Sicelo S and Hesseling, Anneke C (2021) The Impact of the evolving human immunodeficiency virus response on the epidemiology of tuberculosis in South African children and adolescents. Clinical Infectious Diseases, 73 (4). e967-e975. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/ciab095)

F

Festus, Ruth, Seal, Susan ORCID: 0000-0002-3952-1562 , Prempeh, Ruth, Quain, Marian D. and Silva, Goncalo ORCID: 0000-0001-5544-2947 (2023) Improved Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) for the rapid and sensitive detection of Yam mosaic virus. Viruses, 15 (7):1592. pp. 1-17. ISSN 1999-4915 (Online) (doi:https://doi.org/10.3390/v15071592)

G

GC, Sulochan, Khanal, Ashok, GC, Vijay S, Bhattrai, Suman, Panthee, Suresh, Khanal, Aashis, Gaire, Amrit, Poudel, Sagar, Ghimire, Rakesh and Wasti, Sharada Prasad ORCID: 0000-0001-8833-7801 (2022) Burden of tuberculosis and hepatitis co-infection among people living with HIV in Nepal: a systematic review and meta-analysis. Sexual Health, 19 (5). pp. 406-416. ISSN 1448-5028 (Print), 1449-8987 (Online) (doi:https://doi.org/10.1071/SH21216)

Grace, Delia ORCID: 0000-0002-0195-9489 and Cook, Elizabeth (2023) The multiple burdens of zoonoses in low- and middle-income countries: why zoonoses are worse for the poor. In: Singer, Andreas, (ed.) Zoonoses: Infections affecting humans and animals. Springer Nature Switzerland AG, Cham, pp. 1-13. ISBN 978-3030858773 (doi:https://doi.org/10.1007/978-3-030-85877-3_46-1)

Grzywacz, David, Mushobozi, Wilfred L., Parnell, Mark, Jolliffe, Flavia and Wilson, Kenneth (2007) Evaluation of Spodoptera exempta nucleopolyhedrovirus (SpexNPV) for the field control of African armyworm (Spodoptera exempta) in Tanzania. Crop Protection, 27 (1). pp. 17-24. ISSN 0261-2194 (doi:https://doi.org/10.1016/j.cropro.2007.04.005)

H

Hall, Martin J. R., Ghosh, Debashi, Martin-Vega, Daniel, Clark, Brett, Clatworthy, Innes, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Rogers, Matthew E. (2021) Micro-CT visualization of a promastigote secretory gel (PSG) and parasite plug in the digestive tract of the sand fly Lutzomyia longipalpis infected with Leishmania mexicana. PLoS Neglected Tropical Diseases, 15 (8):e0009682. pp. 1-17. ISSN 1935-2735 (Print), 1935-2727 (Online) (doi:https://doi.org/10.1371/journal.pntd.0009682)

Hassell, James M. ORCID: 0000-0002-4710-2827 , Muloi, Dishon M., VanderWaal, Kimberly L. ORCID: 0000-0002-5764-6430 , Ward, Melissa J., Bettridge, Judy ORCID: 0000-0002-3917-4660 , Gitahi, Nduhiu ORCID: 0000-0001-6302-5908 , Ouko, Tom, Imboma, Titus, Akoko, James, Karani, Maurice ORCID: 0000-0001-6467-4352 , Muinde, Patrick ORCID: 0000-0003-3907-7710 , Nakamura, Yukiko ORCID: 0000-0002-3379-0526 , Alumasa, Lorren ORCID: 0000-0002-1723-0510 , Furmaga, Erin, Kaitho, Titus, Amanya, Fredrick, Ogendo, Allan, Fava, Francesco ORCID: 0000-0003-3748-7417 , Wee, Bryan A., Phan, Hang, Kiiru, John, Kang’ethe, Erastus, Kariuki, Sam ORCID: 0000-0003-3209-9503 , Robinson, Timothy, Begon, Michael ORCID: 0000-0003-1715-5327 , Woolhouse, Mark E. J. and Fèvre, Eric M. ORCID: 0000-0001-8931-4986 (2023) Epidemiological connectivity between humans and animals across an urban landscape. Proceedings of the National Academy of Sciences, 120 (29):e2218860120. pp. 1-12. ISSN 0027-8424 (Print), 1091-6490 (Online) (doi:https://doi.org/10.1073/pnas.2218860120)

He, Sha, Yan, Dingding, Shu, Hongying, Tang, Sanyi, Wang, Xia and Cheke, Robert ORCID: 0000-0002-7437-1934 (2023) Randomness accelerates the dynamic clearing process of the COVID-19 outbreaks in China. Mathematical Biosciences, 363:109055. ISSN 0025-5564 (Print), 1879-3134 (Online) (doi:https://doi.org/10.1016/j.mbs.2023.109055)

Holt, J., Pavis, C., Marquier, M., Chancellor, T.C.B. ORCID: 0000-0002-4442-7001 , Urbino, C. and Boissot, N. (2008) Insect-screened cultivation to reduce the invasion of tomato crops by Bemisia tabaci: modelling the impact on virus disease and vector. Agricultural and Forest Entomology, 10 (1). pp. 61-67. ISSN 1461-9555 (Print), 1461-9563 (Online) (doi:https://doi.org/10.1111/j.1461-9563.2007.00356.x)

Hughe, J. and Osman, Muhammad ORCID: 0000-0003-3818-9729 (2014) Diagnosis and management of drug-resistant tuberculosis in South African adults. South African Medical Journal, 104 (12). p. 894. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.9097)

I

Ibrahim Elmi, Zakaria Ali, Sighakoli, Sameer, Tetteh, John and Zand Fard, Nazanin ORCID: 0000-0003-2058-2354 (2023) Case–control study of serum vitamin D concentrations in hospitalised patients with COVID-19 and hospitalised controls suffering with respiratory tract infections of differing aetiology. BMJ, Nutrition, Prevention and Health:e000428. pp. 1-7. ISSN 2516-5542 (Online) (doi:https://doi.org/10.1136/bmjnph-2022-000428)

J

Juříčková, Iva, Hudec, Michael, Votava, Felix, Vosáhlo, Jan, Ovsepian, Saak, Černá, Marie and O'Leary, Valerie (2022) The immunological epigenetic landscape of the human life trajectory. Biomedicines, 10 (11):2894. ISSN 2227-9059 (Online) (doi:https://doi.org/10.3390/biomedicines10112894)

K

Kenyon, Lawrence, Lebas, B.S.M. and Seal, S.E. ORCID: 0000-0002-3952-1562 (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: Implications for international movement of yam germplasm. Archives of Virology, 153 (5). pp. 877-889. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-008-0062-5)

Khan, Palwasha Y, Yates, Tom A, Osman, Muhammad ORCID: 0000-0003-3818-9729 , Warren, Robin M, van der Heijden, Yuri, Padayatchi, Nesri, Nardell, Edward A, Moore, David, Mathema, Barun, Gandhi, Neel, Eldholm, Vegard, Dheda, Keertan, Hesseling, Anneke C, Mizrahi, Valerie, Rustomjee, Roxana and Pym, Alexander (2018) Transmission of drug-resistant tuberculosis in HIV-endemic settings. The Lancet Infectious Diseases, 19 (3). e77-e88. ISSN 1473-3099 (Print), 1474-4457 (Online) (doi:https://doi.org/10.1016/S1473-3099(18)30537-1)

Kimata, B, Masinde, E, Masisila, F, Menya, R, Matondo, D, Maruthi, M.N. ORCID: 0000-0002-8060-866X and Mkamilo, G (2021) Adaptability and phenotypic stability of resistance to two viral diseases and yields traits in Cassava. American Journal of Plant Sciences, 12 (4). pp. 679-705. ISSN 2158-2742 (Print), 2158-2750 (Online) (doi:https://doi.org/10.4236/ajps.2021.124046)

Kubiriba, Jerome (2005) Epidemiology of Banana streak virus (BSV) in East African highland bananas (AAA-EA). PhD thesis, University of Greenwich.

L

Lamberton, Poppy H. L., Cheke, Robert A. ORCID: 0000-0002-7437-1934 , Walker, Martin, Winskill, Peter, Crainey, J. Lee, Boakye, Daniel A., Osei-Atweneboana, Mike Y., Tirados, Iñaki, Wilson, Michael D., Tetteh-Kumah, Anthony, Otoo, Sampson, Post, Rory J. and Basañez, María-Gloria (2016) Onchocerciasis transmission in Ghana: the human blood index of sibling species of the Simulium damnosum complex. Parasites & Vectors, 9 (1). ISSN 1756-3305 (Print), 1756-3305 (Online) (doi:https://doi.org/10.1186/s13071-016-1703-2)

Lamberton, Poppy H.L., Cheke, Robert A. ORCID: 0000-0002-7437-1934 , Winskill, Peter, Tirados, Iñaki, Walker, Martin, Osei-Atweneboana, Mike Y., Biritwum, Nana-Kwadwo, Tetteh-Kumah, Anthony, Boakye, Daniel A., Wilson, Michael D., Post, Rory J. and Basañez, María-Gloria (2015) Onchocerciasis transmission in Ghana: Persistence under different control strategies and the role of the simuliid vectors. PLOS Neglected Tropical Diseases, 9 (4):e0003688. pp. 1-27. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:https://doi.org/10.1371/journal.pntd.0003688)

Lava Kumar, P., Akinbade, S.A., Dixon, A.G.O., Mahungu, N.M., Mutunda, M.P., Kiala, D., Londa, L. and Legg, J.P. (2009) First report of the occurence of East African cassava mosaic virus-Uganda (EACMV-UG) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.02010.x)

Lava Kumar, P., Ayodele, M., Oben, T.T., Mahungu, N.M., Beed, F., Coyne, D., Londa, L., Mutunda, M.P., Kiala, D. and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2009) First report of Banana bunchy top virus in banana and plantain (Musa spp.) in Angola. Plant Pathology, 58 (2). p. 402. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/j.1365-3059.2008.01974.x)

Louw, Eh ORCID: 0000-0003-4385-2249 , Baines, N, Maarman, G, Osman, Muhammad ORCID: 0000-0003-3818-9729 , Sigwadhi, Ln, Irusen, Em, Koegelenberg, Cfn, Doubell, Af, Nathan, Sd, Channick, R and Allwood, Bw (2023) The prevalence of pulmonary hypertension after successful tuberculosis treatment in a community sample of adult patients. Pulmonary Circulation, 13 (1):e12184. pp. 1-13. ISSN 2045-8940 (Online) (doi:https://doi.org/10.1002/pul2.12184)

Loveday, M, Cox, H, Evans, D, Furin, J, Ndjeka, N, Osman, Muhammad ORCID: 0000-0003-3818-9729 and Naidoo, K (2020) Opportunities from a new disease for an old threat: extending COVID-19 efforts to address tuberculosis in South Africa. South African Medical Journal, 110 (12). pp. 1160-1167. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2020.v110i12.15126)

M

Maena, Joel, Banke-Thomas, Aduragbemi ORCID: 0000-0002-4449-0131 , Mukiza, Nelson, Kuteesa, Cynthia Ndikuno, Kakumba, Ronald Makanga, Kataike, Hajira, Kizito, Samuel, Babirye, Juliet Allen and Nakal, Rita (2021) Determinants of viral load non-suppression among adolescents in Mbale District, Eastern Rural Uganda. AIDS Research and Therapy, 18:91. ISSN 1742-6405 (Print), 1742-6405 (Online) (doi:https://doi.org/10.1186/s12981-021-00408-1)

Maruthi, M.N ORCID: 0000-0002-8060-866X , Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) A distinct begomovirus causes Indian dolichos yellow mosaic disease. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01299.x)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Manjunatha, B., Rekha, A.R., Govindappa, M.R., Colvin, John and Muniyappa, V. (2006) Dolichos yellow mosaic virus belongs to a distinct lineage of Old World begomoviruses; its biological and molecular properties. Annals of Applied Biology, 149 (2). pp. 187-195. ISSN 0003-4746 (doi:https://doi.org/10.1111/j.1744-7348.2006.00075.x)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Alam, S.N., Kader, K.A., Cork, Alan and Colvin, John (2006) A novel begomovirus with distinct genomic and phenotypic features infects tomato in Bangladesh. Plant Pathology, 55 (2). p. 290. ISSN 0032-0862 (doi:https://doi.org/10.1111/j.1365-3059.2005.01275.x)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)

Moyes, David L., Martin, Alex, Sawcer, Stephen, Temperton, Nigel ORCID: 0000-0002-7978-3815 , Worthington, Jane, Griffiths, David J. and Venables, Patrick J. (2005) The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics, 86 (3). pp. 337-341. ISSN 0888-7543 (doi:https://doi.org/10.1016/j.ygeno.2005.06.004)

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:https://doi.org/10.1186/s12916-022-02677-7)

Myburgh, H., Kaur, M., Kaur, P., Santos, V., Almeida, C., Hoddinott, G., Wademan, D. T., Lakshmi, P. V. M., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Meehan, S-A., Hesseling, A. C., Purty, A., Singh, U. B. and Trajman, A. (2023) Lessons for TB from the COVID-19 response: qualitative data from Brazil, India and South Africa. Public Health Action, 13 (4):7. pp. 162-168. ISSN 2220-8372 (Online) (doi:https://doi.org/10.5588/pha.23.0044)

Myburgh, H., Meehan, S-A., Wademan, D. T., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Hesseling, A. C. and Hoddinott, G. (2023) TB programme stakeholder views on lessons from the COVID-19 response in South Africa. Public Health Action, 13 (3):7. pp. 97-103. ISSN 2220-8372 (Online) (doi:https://doi.org/10.5588/pha.23.0015)

N

Nanyiti, Sarah, Kabaalu, Richard, Alicai, Titus, Abidrabo, Phillip, Seal, Susan ORCID: 0000-0002-3952-1562 , Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Bailey, A and Foster, Gary (2023) Detection of cassava brown streak ipomoviruses in aphids collected from cassava plants. Frontiers in Sustainable Food Systems, 7:1027842. pp. 1-9. ISSN 2571-581X (Online) (doi:https://doi.org/10.3389/fsufs.2023.1027842)

Nicholson, Tamaryn J, Hoddinott, Graeme, Seddon, James A, Claassens, Mareli M, van der Zalm, Marieke M, Lopez, Elisa, Bock, Peter, Caldwell, Judy, Da Costa, Dawood, de Vaal, Celeste, Dunbar, Rory, Du Preez, Karen, Hesseling, Anneke C, Joseph, Kay, Kriel, Ebrahim, Loveday, Marian, Marx, Florian M, Meehan, Sue-Ann, Purchase, Susan, Naidoo, Kogieleum, Naidoo, Lenny, Solomon-Da Costa, Fadelah, Sloot, Rosa and Osman, Muhammad ORCID: 0000-0003-3818-9729 (2023) A systematic review of risk factors for mortality among tuberculosis patients in South Africa. Systematic Reviews, 12 (23). pp. 1-16. ISSN 2046-4053 (Online) (doi:https://doi.org/10.1186/s13643-023-02175-8)

O

Ojo, Omorogieva ORCID: 0000-0003-0071-3652 , Ojo, Osarhumwese, Feng, Qianqian, Boateng, Joshua ORCID: 0000-0002-6310-729X , Wang, Xiaohua, Brooke, Joanne and Adegboye, Amanda ORCID: 0000-0003-2780-0350 (2022) The Effects of enteral nutrition in critically ill patients with COVID-19: a systematic review and meta-analysis. Nutrients, 14 (5):1120. ISSN 2072-6643 (Online) (doi:https://doi.org/10.3390/nu14051120)

Ojo, Omorogieva ORCID: 0000-0003-0071-3652 , Wang, Xiaohua, Ojo, Osarhumwese, Orjih, Edith, Pavithran, Nivedita, Adegboye, Amanda ORCID: 0000-0003-2780-0350 , Feng, Qian-Qian and Mccrone, Paul ORCID: 0000-0001-7001-4502 (2022) The effects of COVID-19 lockdown on glycaemic control and lipid profile in patients with type 2 diabetes: a systematic review and meta-analysis. International Journal of Environmental Research and Public Health, 19 (3):1095. ISSN 1660-4601 (Online) (doi:https://doi.org/10.3390/ijerph19031095)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Harausz, Elizabeth P., Garcia-Prats, Anthony J., Schaaf, H. Simon, Moore, Brittany K., Hicks, Robert M., Achar, Jay, Amanullah, Farhana, Barry, Pennan, Becerra, Mercedes, Chiotan, Domnica I., Drobac, Peter C., Flood, Jennifer, Furin, Jennifer, Gegia, Medea, Isaakidis, Petros, Mariandyshev, Andrei, Ozere, Iveta, Shah, N. Sarita, Skrahina, Alena, Yablokova, Elena, Seddon, James A. and Hesseling, Anneke C. (2019) Treatment outcomes in global systematic review and patient meta-analysis of children with extensively drug-resistant tuberculosis. Emerging Infectious Diseases, 25 (3). pp. 441-450. ISSN 1080-6040 (Print), 1080-6059 (Online) (doi:https://doi.org/10.3201/eid2503.180852)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Karat, Aaron S, Khan, Munira, Meehan, Sue-Ann, von Delft, Arne, Brey, Zameer, Charalambous, Salome, Hesseling, Anneke C, Naidoo, Pren and Loveday, Marian (2021) Health system determinants of tuberculosis mortality in South Africa: a causal loop model. BMC Health Services Research, 21 (1):388. ISSN 1472-6963 (Online) (doi:https://doi.org/10.1186/s12913-021-06398-0)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Lee, Kevin, Du Preez, Karen, Dunbar, Rory, Hesseling, Anneke C and Seddon, James A (2017) Excellent treatment outcomes in children treated for tuberculosis under routine operational conditions in Cape Town, South Africa. Clinical Infectious Diseases, 65 (9). pp. 1444-1452. ISSN 1058-4838 (Print), 1537-6591 (Online) (doi:https://doi.org/10.1093/cid/cix602)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Seddon, James A., Dunbar, Rory, Draper, Heather R., Lombard, Carl and Beyers, Nulda (2015) The complex relationship between human immunodeficiency virus infection and death in adults being treated for tuberculosis in Cape Town, South Africa. BMC Public Health, 15 (1):556. ISSN 1471-2458 (Online) (doi:https://doi.org/10.1186/s12889-015-1914-z)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Verster, Janette, Dempers, Johan J, Du Preez, Karen, von Delft, Arne, Dunbar, Rory, Welte, Alex, Naidoo, Pren and Hesseling, Anneke C (2021) Tuberculosis in persons with sudden unexpected death, in Cape Town, South Africa. International Journal of Infectious Diseases, 105. pp. 75-82. ISSN 1201-9712 (doi:https://doi.org/10.1016/j.ijid.2021.02.036)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Welte, A, Naidoo, P, Loveday, M and Hesseling, AC (2020) Limitations and potential bias in vital registration data and tuberculosis mortality reporting in South Africa. South African Medical Journal, 110 (7). pp. 607-609. ISSN 0256-9574 (Print), 2078-5135 (Online) (doi:https://doi.org/10.7196/SAMJ.2020.v110i7.14533)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , Welte, Alex, Dunbar, Rory, Brown, Rosemary, Hoddinott, Graeme, Hesseling, Anneke C. and Marx, Florian M. (2019) Morbidity and mortality up to 5 years post tuberculosis treatment in South Africa: a pilot study. International Journal of Infectious Diseases, 85. pp. 57-63. ISSN 1201-9712 (doi:https://doi.org/10.1016/j.ijid.2019.05.024)

Osman, Muhammad ORCID: 0000-0003-3818-9729 , du Preez, K., Naidoo, P., Bock, P., Rabie, H., Dlamini, S. S. and Hesseling, A. C. (2020) Key changes in the public health response to TB and HIV in South Africa. The International Journal of Tuberculosis and Lung Disease, 24 (8). pp. 857-859. ISSN 1027-3719 (Print), 1815-7920 (Online) (doi:https://doi.org/10.5588/ijtld.20.0147)

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Osman, Muhammad ORCID: 0000-0003-3818-9729 , van Schalkwyk, Cari, Naidoo, Pren, Seddon, James A., Dunbar, Rory, Dlamini, Sicelo S., Welte, Alex, Hesseling, Anneke C. and Claassens, Mareli M. (2021) Mortality during tuberculosis treatment in South Africa using an 8-year analysis of the national tuberculosis treatment register. Scientific Reports, 11 (1):15894. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-021-95331-w)

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Pentaris, Panagiotis ORCID: 0000-0001-5593-8555 (2021) Dying in a transhumanist and posthuman society. Routledge Studies in the Sociology of Health and Illness . Routledge - Taylor and Francis Group, London. ISBN 978-0367542177

Purchase, Susan E., Garcia-Prats, Anthony J., De Koker, Petra, Draper, Heather R., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Seddon, James A., Schaaf, H. Simon and Hesseling, Anneke C. (2019) Acceptability of a novel levofloxacin dispersible tablet formulation in young children exposed to multidrug-resistant tuberculosis. Pediatric Infectious Disease Journal, 38 (6). pp. 608-610. ISSN 0891-3668 (Print), 1532-0987 (Online) (doi:https://doi.org/10.1097/INF.0000000000002268)

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Salanti, Georgia ORCID: 0000-0002-3830-8508 , Peter, Natalie ORCID: 0000-0002-5058-3270 , Tonia, Thomy ORCID: 0000-0001-7896-6188 , Holloway, Alexander ORCID: 0000-0003-0917-7235 , White, Ian R. ORCID: 0000-0002-6718-7661 , Darwish, Leila, Low, Nicola ORCID: 0000-0003-4817-8986 , Egger, Matthias ORCID: 0000-0001-7462-5132 , Haas, Andreas D. ORCID: 0000-0002-4849-181X , Fazel, Seena ORCID: 0000-0002-5383-5365 , Kessler, Ronald C. ORCID: 0000-0003-4831-2305 , Herrman, Helen ORCID: 0000-0003-3064-1813 , Kieling, Christian ORCID: 0000-0001-7691-4149 , De Quervain, Dominique J.F. ORCID: 0000-0001-7131-2464 , Vigod, Simone N. ORCID: 0000-0002-2736-9639 , Patel, Vikram, Li, Tianjing, Cuijpers, Pim ORCID: 0000-0001-5497-2743 , Cipriani, Andrea ORCID: 0000-0001-5179-8321 , Furukawa, Toshi A. ORCID: 0000-0003-2159-3776 , Leucht, Stefan ORCID: 0000-0002-4934-4352 , Sambo, Abdulkadir Usman, Onishi, Akira, Sato, Akira, Rodolico, Alessandro, Oliveira Solis, Ana Cristina de, Antoniou, Anastasia, Kapfhammer, Angelika, Ceraso, Anna, O’Mahony, Aoife, Lasserre, Aurélie M., Ipekci, Aziz Mert, Concerto, Carmen, Zangani, Caroline, Igwesi-Chidobe, Chinonso, Diehm, Christina, Demir, Dicle Dilay, Wang, Dongfang, Ostinelli, Edoardo Giuseppe, Sahker, Ethan, Beraldi, Gabriel Henrique, Erzin, Gamze, Nelson, Harrison, Elkis, Helio, Imai, Hissei, Wu, Hui, Kamitsis, Ilias, Filis, Ioannis, Michopoulos, Ioannis, Bighelli, Irene, Hong, James S.W., Ballesteros, Javier, Smith, Katharine A., Yoshida, Kazufumi, Omae, Kenji, Trivella, Marialena, Tada, Masafumi, Reinhard, Matthias A., Ostacher, Michael J., Müller, Monika, Jaramillo, Nathalia Gonzalez, Ferentinos, Panagiotis P., Toyomoto, Rie, Cortese, Samuele, Kishimoto, Sanae, Covarrubias-Castillo, Sergio A., Siafis, Spyridon, Thompson, Trevor, Karageorgiou, Vasilios, Chiocchia, Virginia, Zhu, Yikang, Honda, Yukiko, Sambo, Abdulkadir Usman, Onishi, Akira, Sato, Akira, Rodolico, Alessandro, Oliveira Solis, Ana Cristina de, Antoniou, Anastasia, Kapfhammer, Angelika, Ceraso, Anna, O’Mahony, Aoife, Lasserre, Aurélie M., Ipekci, Aziz Mert, Concerto, Carmen, Zangani, Caroline, Igwesi-Chidobe, Chinonso, Diehm, Christina, Demir, Dicle Dilay, Wang, Dongfang, Ostinelli, Edoardo Giuseppe, Sahker, Ethan, Beraldi, Gabriel Henrique, Erzin, Gamze, Nelson, Harrison, Elkis, Helio, Imai, Hissei, Wu, Hui, Kamitsis, Ilias, Filis, Ioannis, Michopoulos, Ioannis, Bighelli, Irene, Hong, James S.W., Ballesteros, Javier, Smith, Katharine A., Yoshida, Kazufumi, Omae, Kenji, Trivella, Marialena, Tada, Masafumi, Reinhard, Matthias A., Ostacher, Michael J., Müller, Monika, Jaramillo, Nathalia Gonzalez, Ferentinos, Panagiotis P., Toyomoto, Rie, Cortese, Samuele, Kishimoto, Sanae, Covarrubias-Castillo, Sergio A., Siafis, Spyridon, Thompson, Trevor ORCID: 0000-0001-9880-782X , Karageorgiou, Vasilios, Chiocchia, Virginia, Zhu, Yikang and Honda, Yukiko (2022) The impact of the COVID-19 pandemic and associated control measures on the mental health of the general population. Annals of Internal Medicine, 175 (11). pp. 1560-1571. ISSN 0003-4819 (Print), 1539-3704 (Online) (doi:https://doi.org/10.7326/M22-1507)

Seal, Susan ORCID: 0000-0002-3952-1562 and Muller, Emanuelle (2007) Molecular analysis of a full-length sequence of a new yam badnavirus from Dioscorea sansibarensis. Archives of Virology, 152 (4). pp. 819-825. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-006-0888-7)

Seddon, James A, Whittaker, Elizabeth, Kampmann, Beate, Lewinsohn, Deborah A, Osman, Muhammad ORCID: 0000-0003-3818-9729 , Hesseling, Anneke C, Rustomjee, Roxana and Amanullah, Farhana (2018) The evolving research agenda for paediatric tuberculosis infection. The Lancet Infectious Diseases, 19 (9). e322-e329. ISSN 1473-3099 (Print), 1474-4457 (Online) (doi:https://doi.org/10.1016/S1473-3099(18)30787-4)

Seddon, James A. ORCID: 0000-0002-2296-2302 , Garcia-Prats, Anthony J., Purchase, Susan E., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Demers, Anne-Marie, Hoddinott, Graeme, Crook, Angela M., Owen-Powell, Ellen, Thomason, Margaret J., Turkova, Anna, Gibb, Diana M., Fairlie, Lee, Martinson, Neil, Schaaf, H. Simon and Hesseling, Anneke C. (2018) Levofloxacin versus placebo for the prevention of tuberculosis disease in child contacts of multidrug-resistant tuberculosis: study protocol for a phase III cluster randomised controlled trial (TB-CHAMP). Trials, 19 (1):693. ISSN 1745-6215 (Online) (doi:https://doi.org/10.1186/s13063-018-3070-0)

Sharaf, Abdoallah, Nuc, Przemysław, Ripl, Jan, Alquicer, Glenda, Ibrahim, Emad, Wang, Xifeng, Maruthi, M.N. ORCID: 0000-0002-8060-866X and Kundu, Jiban Kumar (2023) Transcriptome dynamics in triticum aestivum genotypes associated with resistance against the wheat dwarf virus. Viruses, 15:689. pp. 1-20. ISSN 1999-4915 (Online) (doi:https://doi.org/10.3390/v15030689)

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Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

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Su, Ching-Yao, Wang, Shi-Yun, Shie, Jiun-Jie, Jeng, King-Song, Temperton, Nigel J. ORCID: 0000-0002-7978-3815 , Fang, Jim-Min, Wong, Chi-Huey and Cheng, Yih-Shyun E. (2008) In vitro evaluation of neuraminidase inhibitors using the neuraminidase-dependent release assay of hemagglutinin-pseudotyped viruses. Antiviral Research, 79 (3). pp. 199-205. ISSN 0166-3542 (doi:https://doi.org/10.1016/j.antiviral.2008.03.002)

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Tang, Sanyi, Wang, Xia, Tang, Biao, He, Sha, Huang, Chenxi, Shao, Yiming, Xiao, Yanni and Cheke, Robert ORCID: 0000-0002-7437-1934 (2023) Threshold conditions for curbing COVID‑19 with a dynamic zero‑case policy derived from 101 outbreaks in China. BMC Public Health, 23:1084. pp. 1-12. ISSN 1471-2458 (doi:https://doi.org/10.1186/s12889-023-16009-8)

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Tugume, Arthur, Mbanzibwa, Deusdedith R, Alicai, Titus, Omongo, Christopher and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2023) Endemism and reemergence potential of the ipomovirus Sweet potato mild mottle virus (family Potyviridae) in Eastern Africa: half a century of mystery. Phytobiomes Journal, 7 (1). pp. 5-28. ISSN 2471-2906 (Online) (doi:https://doi.org/10.1094/PBIOMES-05-22-0031-RVW)

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Viljoen, L., Hendricks, P., Hoddinott, G., Vanqa, N., Osman, Muhammad ORCID: 0000-0003-3818-9729 , Hesseling, A. C. and Meehan, S-A. (2022) Early interactions with newly diagnosed TB patients in hospital can support linkage to care. Public Health Action, 12 (3):7. pp. 121-127. ISSN 2220-8372 (Online) (doi:https://doi.org/10.5588/pha.22.0012)

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Wasti, Sharada Prasad ORCID: 0000-0001-8833-7801 , Simkhada, Padam, Ale Magar, Sudip and van Teijlingen, Edwin (2021) Nepalese health system response to fight against COVID-19 pandemic. Europasian Journal of Medical Sciences, 3 (1). pp. 98-104. ISSN 2717-4646 (Print), 2717-4654 (Online) (doi:https://doi.org/10.46405/ejms.v3i1.262)

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X

Xia, Fan, Yang, Xinpei, Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Xiao, Yanni (2021) Quantifying competitive advantages of mutant strains in a population involving importation and mass vaccination rollout. Infectious Disease Modelling, 6. pp. 988-996. ISSN 2468-0427 (doi:https://doi.org/10.1016/j.idm.2021.08.001)

Y

Yan, Quinling, Cheke, Robert ORCID: 0000-0002-7437-1934 and Tang, Sanyi (2022) Coupling an individual adaptive-decision model with a SIRV model of influenza vaccination reveals new insights for epidemic control. Statistics in Medicine, 42 (5). pp. 716-729. ISSN 0277-6715 (Print), 1097-0258 (Online) (doi:https://doi.org/10.1002/sim.9639)

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Z

Zembere, Kennedy, Chirombo, James, Nasoni, Peter, McDermott, Daniel, Divala, Lizzie, Hawkes, Frances ORCID: 0000-0002-0964-3702 and Jones, Christopher M. (2022) The human-baited host decoy trap (HDT) is an efficient sampling device for exophagic malaria mosquitoes within irrigated lands in southern Malawi. Scientific reports, 12:3428. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-022-07422-x)

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