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Items where Greenwich Author is "Armitage, Andrew"

Items where Greenwich Author is "Armitage, Andrew"

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Jump to: Alternaria mali, Dothideomycete, fungal barcoding, pathotype, section, species complex | CDC, host-specific toxin, mating type, Dothideomycetes, Alternaria mali, Alternaria gaisen, nanopore | Crown rot; Colletotrichum gloeosporiodes; Genome; Gibberella; Fragaria | Fusarium oxysporum f. sp. narcissi, Narcissus, daffodil, basal rot, pathogenicity, secreted in Xylem | Fusarium oxysporum f. sp. pisi, Pea, Fusarium wilt, formae speciales, race, Secreted In Xylem, gene expression, qPCR | QTL, Macronutrients, Symbiont, Network, Trade-off, Solidity, Rhizotron, Length distribution, AMF, Image analysis | apple black spot, apple scab, ascospore production, host mixture, super-race | apple canker, NGS | apple scab, apple black spot, venturia inaequalis genome | avirulence, VCG, wilt, octopoid, effectors, NGS | avirulence, bacterial canker, comparative genomics, host specialization, prediction, Pseudomonas, toxins, type III effectors | crown rot, oomycete, phylogenomics, effectors, cryptic species | disease resistance, Fragaria x ananassa, wilt, NDVI, NBS, breeding | fragaria, strawberry, diploid, polyploid, CRISPR/Cas9, phytoene desaturase | nectria, basal rot, disease complex, SIX2, secreted in xylem | oomycete, effector, avirulence, fragaria x ananassa, RxLR, crinkler | red core, oomycete, RNA-Seq, host–microbe interactions, nanopore sequencing, population resequencing, race structure | secreted in xylem (SIX), onion, Fusarium oxysporum f. sp. cepae, effector genes, pathogenicity, Fusarium basal rot
Number of items: 18.

Alternaria mali, Dothideomycete, fungal barcoding, pathotype, section, species complex

Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Barbara, Dez J., Harrison, Richard J., Lane, Charles R., Sreenivasaprasad, Surapareddy, Woodhall, James W. and Clarkson, John P. (2015) Discrete lineages within Alternaria alternata species group: identification using new highly variable loci and support from morphological characters. Fungal Biology, 119 (11). pp. 994-1006. ISSN 1878-6146 (doi:https://doi.org/10.1016/j.funbio.2015.06.012)

CDC, host-specific toxin, mating type, Dothideomycetes, Alternaria mali, Alternaria gaisen, nanopore

Armitage, Andrew ORCID: 0000-0002-0610-763X, Cockerton, Helen M., Sreenivasaprasad, Surapareddy, Woodhall, James, Lane, Charles R., Harrison, Richard J. and Clarkson, John P. (2020) Genomics evolutionary history and diagnostics of the Alternaria alternata species group including apple and Asian pear pathotypes. Frontiers in Microbiology, 10:3124. ISSN 1664-302X (Online) (doi:https://doi.org/10.3389/fmicb.2019.03124)

Crown rot; Colletotrichum gloeosporiodes; Genome; Gibberella; Fragaria

Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Nellist, Charlotte F. ORCID: 0000-0002-7453-3710, Bates, Helen J. ORCID: 0000-0002-7978-9213, Zhang, Liqing, Zou, Xiaohua, Gao, Qing-Hua, Harrison, Richard J. ORCID: 0000-0002-3307-3519 and Rokas, Antonis (2020) Draft genome sequence of the strawberry anthracnose pathogen colletotrichum fructicola. Microbiology Resource Announcements, 9 (12):e01598-19. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/MRA.01598-19)

Fusarium oxysporum f. sp. narcissi, Narcissus, daffodil, basal rot, pathogenicity, secreted in Xylem

Taylor, Andrew, Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Handy, Claire, Jackson, Alison C., Hulin, Michelle T., Harrison, Richard J. and Clarkson, John P. (2019) Basal rot of Narcissus: understanding pathogenicity in Fusarium oxysporum f. sp. narcissi. Frontiers in Microbiology, 10:2905. ISSN 1664-302X (Online) (doi:https://doi.org/10.3389/fmicb.2019.02905)

Fusarium oxysporum f. sp. pisi, Pea, Fusarium wilt, formae speciales, race, Secreted In Xylem, gene expression, qPCR

Jenkins, Sascha, Taylor, Andrew, Jackson, Alison C., Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Bates, Helen J., Mead, Andrew, Harrison, Richard J. and Clarkson, John P. (2021) Identification and expression of "Secreted In Xylem" pathogenicity genes in fusarium oxysporum f. sp. pisi. Frontiers in Microbiology, 12:593140. ISSN 1664-302X (Online) (doi:https://doi.org/10.3389/fmicb.2021.593140)

QTL, Macronutrients, Symbiont, Network, Trade-off, Solidity, Rhizotron, Length distribution, AMF, Image analysis

Cockerton, Helen Maria ORCID: 0000-0002-7375-1804, Li, Bo ORCID: 0000-0003-0077-4383, Stavridou, Eleftheria, Johnson, Abigail, Karlström, Amanda, Armitage, Andrew Douglas ORCID: 0000-0002-0610-763X, Martinez-Crucis, Ana, Galiano-Arjona, Lorena, Harrison, Nicola, Barber-Pérez, Nuria, Cobo-Medina, Magdalena and Harrison, Richard Jonathan ORCID: 0000-0002-3307-3519 (2020) Genetic and phenotypic associations between root architecture, arbuscular mycorrhizal fungi colonisation and low phosphate tolerance in strawberry (Fragaria × ananassa). BMC Plant Biology, 20:154. ISSN 1471-2229 (Online) (doi:https://doi.org/10.1186/s12870-020-02347-x)

apple black spot, apple scab, ascospore production, host mixture, super-race

Passey, Thomas A. J. ORCID: 0000-0002-5678-2481, Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Sobczyk, Maria K., Shaw, Michael W. ORCID: 0000-0002-6993-048X and Xu, Xiangming ORCID: 0000-0002-4567-7117 (2020) Genomic sequencing indicates non‐random mating of Venturia inaequalis in a mixed cultivar orchard. Plant Pathology, 69 (4). pp. 669-676. ISSN 0032-0862 (Print), 1365-3059 (Online) (doi:https://doi.org/10.1111/ppa.13150)

apple canker, NGS

Gómez-Cortecero, Antonio, Armitage, Andrew D. ORCID: 0000-0002-0610-763X and Harrison, Richard J. (2015) Draft genome sequence of a European isolate of the apple canker pathogen Neonectria ditissima. Genome Announcements, 3 (6):e01243-15. ISSN 2169-8287 (Online) (doi:https://doi.org/10.1128/genomeA.01243-15)

apple scab, apple black spot, venturia inaequalis genome

Passey, Thomas A. J. ORCID: 0000-0002-5678-2481, Armitage, Andrew D. ORCID: 0000-0002-0610-763X and Xu, Xiangming (2018) Annotated draft genome sequence of the apple scab pathogen Venturia inaequalis. Microbiology Resource Announcements, 7 (12):e01062-18. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/mra.01062-18)

avirulence, VCG, wilt, octopoid, effectors, NGS

Fan, Rong, Cockerton, Helen M., Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Bates, Helen, Cascant-Lopez, Emma, Antanaviciute, Laima, Xu, Xiangming, Hu, Xiaoping and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Vegetative compatibility groups partition variation in the virulence of Verticillium dahliae on strawberry. PLOS ONE, 13 (2):e0191824. ISSN 1932-6203 (Online) (doi:https://doi.org/10.1371/journal.pone.0191824)

avirulence, bacterial canker, comparative genomics, host specialization, prediction, Pseudomonas, toxins, type III effectors

Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)

crown rot, oomycete, phylogenomics, effectors, cryptic species

Armitage, Andrew ORCID: 0000-0002-0610-763X, Nellist, Charlotte, Bates, Helen, Sobczyk, Maria, Luberti, Matteo, Lewis, Laura and Harrison, Richard (2021) Comparative analysis of host-associated variation in phytophthora cactorum. Frontiers in Microbiology, 12:679936. ISSN 1664-302X (doi:https://doi.org/10.3389/fmicb.2021.679936)

disease resistance, Fragaria x ananassa, wilt, NDVI, NBS, breeding

Cockerton, Helen M., Li, Bo, Vickerstaff, Robert J., Eyre, Catherine A., Sargent, Daniel J., Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Marina-Montes, Cesar, Garcia-Cruz, Ana, Passey, Andrew J., Simpson, David W. and Harrison, Richard Jonathan (2019) Identifying Verticillium dahliae resistance in strawberry through disease screening of multiple populations and image based phenotyping. Frontiers in Plant Science, 10:924. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2019.00924)

fragaria, strawberry, diploid, polyploid, CRISPR/Cas9, phytoene desaturase

Wilson, Fiona M. ORCID: 0000-0002-2073-7400, Harrison, Kate, Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Simkin, Andrew J. and Harrison, Richard J. (2019) CRISPR/Cas9-mediated mutagenesis of phytoene desaturase in diploid and octoploid strawberry. Plant Methods, 15:45. ISSN 1746-4811 (doi:https://doi.org/10.1186/s13007-019-0428-6)

nectria, basal rot, disease complex, SIX2, secreted in xylem

Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Taylor, Andrew, Hulin, Michelle T., Jackson, Alison C., Harrison, Richard J. and Clarkson, John P. (2019) Draft genome sequence of an onion basal rot isolate of Fusarium proliferatum. Microbiology Resource Announcements, 8 (1):e01385-18. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/MRA.01385-18)

oomycete, effector, avirulence, fragaria x ananassa, RxLR, crinkler

Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Lysøe, Erik, Nellist, Charlotte F. ORCID: 0000-0002-7453-3710, Lewis, Laura A., Cano, Liliana M., Harrison, Richard J. ORCID: 0000-0002-3307-3519 and Brurberg, May B. (2018) Bioinformatic characterisation of the effector repertoire of the strawberry pathogen Phytophthora cactorum. PLOS ONE, 13 (10):e0202305. ISSN 1932-6203 (Online) (doi:https://doi.org/10.1371/journal.pone.0202305)

red core, oomycete, RNA-Seq, host–microbe interactions, nanopore sequencing, population resequencing, race structure

Adams, Thomas M., Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Sobczyk, Maria K., Bates, Helen J., Tabima, Javier F., Kronmiller, Brent A., Tyler, Brett M., Grünwald, Niklaus J., Dunwell, Jim M., Nellist, Charlotte F. and Harrison, Richard J. (2020) Genomic investigation of the strawberry pathogen Phytophthora fragariae indicates pathogenicity is associated with transcriptional variation in three key races. Frontiers in Microbiology, 11:490. ISSN 1664-302X (Online) (doi:https://doi.org/10.3389/fmicb.2020.00490)

secreted in xylem (SIX), onion, Fusarium oxysporum f. sp. cepae, effector genes, pathogenicity, Fusarium basal rot

Armitage, Andrew D. ORCID: 0000-0002-0610-763X, Taylor, Andrew, Sobczyk, Maria K., Baxter, Laura ORCID: 0000-0003-3287-7547, Greenfield, Bethany P. J., Bates, Helen J., Wilson, Fiona, Jackson, Alison C., Ott, Sascha, Harrison, Richard J. ORCID: 0000-0002-3307-3519 and Clarkson, John P. (2018) Characterisation of pathogen-specific regions and novel effector candidates in Fusarium oxysporum f. sp. cepae. Scientific Reports, 8:13530. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-018-30335-7)

This list was generated on Mon Sep 20 11:04:50 2021 UTC.