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Items where Author is "Seal, Susan E."

Items where Author is "Seal, Susan E."

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acquisition Agroecology badnavirus begomovirus begomoviruses Bemisia tabaci Betaflexiviridae biosafety level Cassava cassava brown streak disease Cassava brown streak virus Climate-change ecology closed‑tube reverse transcription loop‑mediated isothermal amplification (CT-RT-LAMP) coat proteins Complete genome containment denaturing gradient gel electrophoresis (DGGE) Detection diagnosis diagnostic assay diagnostics Dioscorea Dioscorea cayenensis-rotundata complex Dioscorea rotundata Dioscorea spp. East Africa Ecological epidemiology Ecological modelling endogenous badnaviral elements Endogenous Dioscorea bacilliform virus endogenous pararetrovirus Endogenous pararetrovirus (EPRV) Entomology epidemiology Episomal badnavirus Euphorbia ringspot virus Food security Genetic diversity GMO Host range HTS In vitro culture infectious clone Infectious clones Integration international development Invasive species ITPase mitochondrial cytochrome oxidase mitochondrial cytochrome oxidase I gene MtCO1 multiplex PCR next-generation sequencing Phylogeny plant virus Population dynamics Potyvirus recombinase polymerase amplification Recombination research impact RNA-Seq rolling circle amplification Sequence diversity SLCMV Sub-Saharan Africa sweet potato tomato leaf curl virus transmission TYLCV Ugandan cassava brown streak virus VAMP2 Virus virus detection virus-vector relationships weed West Africa whitefly whiteflyacquisition yam Yam mosaic virus YMV
Number of items: 120.

acquisition

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Agroecology

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

badnavirus

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Sewe, Steven O., Sicat, Juan Paolo A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2018) Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses. Physiological and Molecular Plant Pathology, 105. pp. 54-66. ISSN 0885-5765 (Print), 1096-1178 (Online) (doi:https://doi.org/10.1016/j.pmpp.2018.06.003)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2014) The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species. Molecular Plant Pathology, 15 (8). pp. 790-801. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12137)

begomovirus

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

begomoviruses

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

Bemisia tabaci

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Colvin, John, Gibson, Gabriella, Thwaites, Richard M., Banks, Gina K. and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2004) Reproductive incompatibility and cytochrome oxidase I gene sequence variability amongst host-adapted and geographically separate Bemisia tabaci populations (Hemiptera: Aleyrodidae). Systematic Entomology, 29 (4). pp. 560-568. ISSN 0307-6970 (doi:https://doi.org/10.1111/j.0307-6970.2004.00272.x)

Betaflexiviridae

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

biosafety level

Brewer, Helen C., Hird, Diane L., Bailey, Andy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 and Foster, Gary D. (2018) A guide to the contained use of plant virus infectious clones. Plant Biotechnology Journal, 16 (4). pp. 832-843. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:https://doi.org/10.1111/pbi.12876)

Cassava

Tomlinson, Katie R., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2019) Utilization of infectious clones to visualize Cassava brown streak virus replication in planta and gain insights into symptom development. Virus Genes, 55 (6). pp. 825-833. ISSN 0920-8569 (Print), 1572-994X (Online) (doi:https://doi.org/10.1007/s11262-019-01697-5)

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Colvin, John, Gibson, Gabriella, Thwaites, Richard M., Banks, Gina K. and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2004) Reproductive incompatibility and cytochrome oxidase I gene sequence variability amongst host-adapted and geographically separate Bemisia tabaci populations (Hemiptera: Aleyrodidae). Systematic Entomology, 29 (4). pp. 560-568. ISSN 0307-6970 (doi:https://doi.org/10.1111/j.0307-6970.2004.00272.x)

cassava brown streak disease

James, Amy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. ORCID: 0000-0002-7594-3703 and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2021) Viral inosine triphosphatase: A mysterious enzyme with typical activity, but an atypical function. Molecular Plant Pathology, 22 (3). pp. 382-389. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.13021)

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

Cassava brown streak virus

Tomlinson, Katie R., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2019) Utilization of infectious clones to visualize Cassava brown streak virus replication in planta and gain insights into symptom development. Virus Genes, 55 (6). pp. 825-833. ISSN 0920-8569 (Print), 1572-994X (Online) (doi:https://doi.org/10.1007/s11262-019-01697-5)

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

Climate-change ecology

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

closed‑tube reverse transcription loop‑mediated isothermal amplification (CT-RT-LAMP)

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

coat proteins

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Complete genome

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

containment

Brewer, Helen C., Hird, Diane L., Bailey, Andy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 and Foster, Gary D. (2018) A guide to the contained use of plant virus infectious clones. Plant Biotechnology Journal, 16 (4). pp. 832-843. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:https://doi.org/10.1111/pbi.12876)

denaturing gradient gel electrophoresis (DGGE)

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Detection

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

diagnosis

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Nkere, Chukwuemeka, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2015) Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. Journal of Virological Methods, 222. pp. 138-144. ISSN 0166-0934 (doi:https://doi.org/10.1016/j.jviromet.2015.06.011)

diagnostic assay

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

diagnostics

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Dioscorea

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

Dioscorea cayenensis-rotundata complex

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2014) The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species. Molecular Plant Pathology, 15 (8). pp. 790-801. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12137)

Dioscorea rotundata

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

Dioscorea spp.

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Sewe, Steven O., Sicat, Juan Paolo A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2018) Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses. Physiological and Molecular Plant Pathology, 105. pp. 54-66. ISSN 0885-5765 (Print), 1096-1178 (Online) (doi:https://doi.org/10.1016/j.pmpp.2018.06.003)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Nkere, Chukwuemeka, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2015) Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. Journal of Virological Methods, 222. pp. 138-144. ISSN 0166-0934 (doi:https://doi.org/10.1016/j.jviromet.2015.06.011)

East Africa

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

Ecological epidemiology

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

Ecological modelling

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

endogenous badnaviral elements

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Endogenous Dioscorea bacilliform virus

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

endogenous pararetrovirus

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2014) The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species. Molecular Plant Pathology, 15 (8). pp. 790-801. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12137)

Endogenous pararetrovirus (EPRV)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Entomology

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

epidemiology

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

Episomal badnavirus

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Euphorbia ringspot virus

James, Amy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. ORCID: 0000-0002-7594-3703 and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2021) Viral inosine triphosphatase: A mysterious enzyme with typical activity, but an atypical function. Molecular Plant Pathology, 22 (3). pp. 382-389. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.13021)

Food security

Tomlinson, Katie R., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2019) Utilization of infectious clones to visualize Cassava brown streak virus replication in planta and gain insights into symptom development. Virus Genes, 55 (6). pp. 825-833. ISSN 0920-8569 (Print), 1572-994X (Online) (doi:https://doi.org/10.1007/s11262-019-01697-5)

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

Genetic diversity

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

GMO

Brewer, Helen C., Hird, Diane L., Bailey, Andy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 and Foster, Gary D. (2018) A guide to the contained use of plant virus infectious clones. Plant Biotechnology Journal, 16 (4). pp. 832-843. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:https://doi.org/10.1111/pbi.12876)

Host range

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

HTS

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

In vitro culture

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Sewe, Steven O., Sicat, Juan Paolo A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2018) Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses. Physiological and Molecular Plant Pathology, 105. pp. 54-66. ISSN 0885-5765 (Print), 1096-1178 (Online) (doi:https://doi.org/10.1016/j.pmpp.2018.06.003)

infectious clone

Brewer, Helen C., Hird, Diane L., Bailey, Andy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 and Foster, Gary D. (2018) A guide to the contained use of plant virus infectious clones. Plant Biotechnology Journal, 16 (4). pp. 832-843. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:https://doi.org/10.1111/pbi.12876)

Infectious clones

Tomlinson, Katie R., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2019) Utilization of infectious clones to visualize Cassava brown streak virus replication in planta and gain insights into symptom development. Virus Genes, 55 (6). pp. 825-833. ISSN 0920-8569 (Print), 1572-994X (Online) (doi:https://doi.org/10.1007/s11262-019-01697-5)

Integration

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

international development

Colvin, John, Nagaraju, N., Moreno Leguizamon, Carlos ORCID: 0000-0002-4294-3387 , Govindappa, R.M., Manjunatha Reddy, T.B., Padmaja, S.A., Joshi, Neena, Hanson, Peter M., Seal, Susan E. and Muniyappa, V. (2012) Socio-economic and scientific impact created by whitefly-transmitted, plant- virus disease resistant tomato varieties in Southern India. Journal of Integrative Agriculture, 11 (2). pp. 337-345. ISSN 2095-3119

Invasive species

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

ITPase

James, Amy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. ORCID: 0000-0002-7594-3703 and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2021) Viral inosine triphosphatase: A mysterious enzyme with typical activity, but an atypical function. Molecular Plant Pathology, 22 (3). pp. 382-389. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.13021)

mitochondrial cytochrome oxidase

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

mitochondrial cytochrome oxidase I gene

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Colvin, John, Gibson, Gabriella, Thwaites, Richard M., Banks, Gina K. and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2004) Reproductive incompatibility and cytochrome oxidase I gene sequence variability amongst host-adapted and geographically separate Bemisia tabaci populations (Hemiptera: Aleyrodidae). Systematic Entomology, 29 (4). pp. 560-568. ISSN 0307-6970 (doi:https://doi.org/10.1111/j.0307-6970.2004.00272.x)

MtCO1

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

multiplex PCR

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

next-generation sequencing

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

Phylogeny

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2014) The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species. Molecular Plant Pathology, 15 (8). pp. 790-801. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12137)

plant virus

Brewer, Helen C., Hird, Diane L., Bailey, Andy M., Seal, Susan E. ORCID: 0000-0002-3952-1562 and Foster, Gary D. (2018) A guide to the contained use of plant virus infectious clones. Plant Biotechnology Journal, 16 (4). pp. 832-843. ISSN 1467-7644 (Print), 1467-7652 (Online) (doi:https://doi.org/10.1111/pbi.12876)

Population dynamics

Kriticos, Darren J., Darnell, Ross E., Yonow, Tania, Ota, Noboru, Sutherst, Robert W., Parry, Hazel R., Mugerwa, Habibu, Maruthi, M.N. ORCID: 0000-0002-8060-866X , Seal, Susan E. ORCID: 0000-0002-3952-1562 , Colvin, John, Macfadyen, Sarina, Kalyebi, Andrew, Hulthen, Andrew and De Barro, Paul J. (2020) Improving climate suitability for Bemisia tabaci in East Africa is correlated with increased prevalence of whiteflies and cassava diseases. Scientific reports, 10 (1):22049. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-020-79149-6)

Potyvirus

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

recombinase polymerase amplification

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Nkere, Chukwuemeka, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2015) Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. Journal of Virological Methods, 222. pp. 138-144. ISSN 0166-0934 (doi:https://doi.org/10.1016/j.jviromet.2015.06.011)

Recombination

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

research impact

Colvin, John, Nagaraju, N., Moreno Leguizamon, Carlos ORCID: 0000-0002-4294-3387 , Govindappa, R.M., Manjunatha Reddy, T.B., Padmaja, S.A., Joshi, Neena, Hanson, Peter M., Seal, Susan E. and Muniyappa, V. (2012) Socio-economic and scientific impact created by whitefly-transmitted, plant- virus disease resistant tomato varieties in Southern India. Journal of Integrative Agriculture, 11 (2). pp. 337-345. ISSN 2095-3119

RNA-Seq

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Sewe, Steven O., Sicat, Juan Paolo A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2018) Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses. Physiological and Molecular Plant Pathology, 105. pp. 54-66. ISSN 0885-5765 (Print), 1096-1178 (Online) (doi:https://doi.org/10.1016/j.pmpp.2018.06.003)

rolling circle amplification

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Sequence diversity

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

SLCMV

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Sub-Saharan Africa

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

sweet potato

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Colvin, John, Gibson, Gabriella, Thwaites, Richard M., Banks, Gina K. and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2004) Reproductive incompatibility and cytochrome oxidase I gene sequence variability amongst host-adapted and geographically separate Bemisia tabaci populations (Hemiptera: Aleyrodidae). Systematic Entomology, 29 (4). pp. 560-568. ISSN 0307-6970 (doi:https://doi.org/10.1111/j.0307-6970.2004.00272.x)

tomato leaf curl virus

Colvin, John, Nagaraju, N., Moreno Leguizamon, Carlos ORCID: 0000-0002-4294-3387 , Govindappa, R.M., Manjunatha Reddy, T.B., Padmaja, S.A., Joshi, Neena, Hanson, Peter M., Seal, Susan E. and Muniyappa, V. (2012) Socio-economic and scientific impact created by whitefly-transmitted, plant- virus disease resistant tomato varieties in Southern India. Journal of Integrative Agriculture, 11 (2). pp. 337-345. ISSN 2095-3119

transmission

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

TYLCV

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Ugandan cassava brown streak virus

Tomlinson, Katie R., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. ORCID: 0000-0002-1979-1397 (2019) Utilization of infectious clones to visualize Cassava brown streak virus replication in planta and gain insights into symptom development. Virus Genes, 55 (6). pp. 825-833. ISSN 0920-8569 (Print), 1572-994X (Online) (doi:https://doi.org/10.1007/s11262-019-01697-5)

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

VAMP2

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Virus

Tomlinson, Katie R., Pablo-Rodriguez, José Luis, Bunawan, Hamidun, Nanyit, Sarah, Green, Patrick, Miller, Josie, Seal, Susan E. ORCID: 0000-0002-3952-1562 , Bailey, Andy M. and Foster, Gary D. (2019) Cassava brown streak virus Ham1 protein hydrolyses mutagenic nucleotides and is a necrosis determinant. Molecular Plant Pathology, 20 (8). pp. 1080-1092. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12813)

virus detection

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Sewe, Steven O., Visendi, Paul, Oyekanmi, Joshua O., Quain, Marian D., Akomeah, Belinda, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2019) Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing. Plants, 8 (6):167. ISSN 2223-7747 (Print), 2223-7747 (Online) (doi:https://doi.org/10.3390/plants8060167)

virus-vector relationships

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

weed

Maruthi, M.N. ORCID: 0000-0002-8060-866X , Colvin, John, Gibson, Gabriella, Thwaites, Richard M., Banks, Gina K. and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2004) Reproductive incompatibility and cytochrome oxidase I gene sequence variability amongst host-adapted and geographically separate Bemisia tabaci populations (Hemiptera: Aleyrodidae). Systematic Entomology, 29 (4). pp. 560-568. ISSN 0307-6970 (doi:https://doi.org/10.1111/j.0307-6970.2004.00272.x)

West Africa

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

whitefly

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

Mugerwa, Habibu ORCID: 0000-0001-5077-0167 , Colvin, John ORCID: 0000-0001-6413-580X , Alicai, Titus ORCID: 0000-0002-4489-3133 , Omongo, Christopher A., Kabaalu, Richard, Visendi, Paul ORCID: 0000-0001-7114-7710 , Sseruwagi, Peter ORCID: 0000-0002-4128-0294 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2021) Genetic diversity of whitefly (Bemisia spp.) on crop and uncultivated plants in Uganda: implications for the control of this devastating pest species complex in Africa. Journal of Pest Science, 94 (4). pp. 1307-1330. ISSN 1612-4758 (Print), 1612-4766 (Online) (doi:https://doi.org/10.1007/s10340-021-01355-6)

Chowda-Reddy, R.V., Kirankumar, M., Seal, Susan E. ORCID: 0000-0002-3952-1562 , Muniyappa, V., Valand, Girish B., Govindappa, M.R. and Colvin, John (2012) Bemisia tabaci phylogenetic groups in India and the relative transmission efficacy of Tomato leaf curl Bangalore virus by an indigenous and an exotic population. Journal of Integrative Agriculture, 11 (2). pp. 235-248. ISSN 2095-3119 (doi:https://doi.org/10.1016/S2095-3119(12)60008-2)

whiteflyacquisition

Fan, Yun yun, Zhong, Yu-Wei, Zhao, Jing, Chi, Yao, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Liu, Shu-Sheng, Seal, Susan E. ORCID: 0000-0002-3952-1562 and Wang, Xiao-Wei (2021) Bemisia tabaci vesicle-associated membrane protein 2 interacts with begomoviruses and plays a role in virus acquisition. Cells, 10 (7):1700. ISSN 2073-4409 (Online) (doi:https://doi.org/10.3390/cells10071700)

yam

Silva, Goncalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:https://doi.org/10.3389/fpls.2022.846989)

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Silva, Gonçalo ORCID: 0000-0001-5544-2947 and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses. Archives of Virology. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-017-3605-9)

Turaki, Aliyu A., Bömer, Moritz ORCID: 0000-0003-1003-9622 , Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2017) PCR-DGGE analysis: Unravelling complex mixtures of badnavirus sequences present in yam germplasm. Viruses, 9 (7). p. 181. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v9070181)

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Turaki, Aliyu A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2016) A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses. Viruses, 8:188. pp. 1-22. ISSN 1999-4915 (Print), 1999-4915 (Online) (doi:https://doi.org/10.3390/v8070188)

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Nkere, Chukwuemeka, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2015) Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. Journal of Virological Methods, 222. pp. 138-144. ISSN 0166-0934 (doi:https://doi.org/10.1016/j.jviromet.2015.06.011)

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2014) The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species. Molecular Plant Pathology, 15 (8). pp. 790-801. ISSN 1464-6722 (Print), 1364-3703 (Online) (doi:https://doi.org/10.1111/mpp.12137)

Yam mosaic virus

Bömer, Moritz ORCID: 0000-0003-1003-9622 , Rathnayake, Ajith I., Visendi, Paul, Sewe, Steven O., Sicat, Juan Paolo A., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2018) Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses. Physiological and Molecular Plant Pathology, 105. pp. 54-66. ISSN 0885-5765 (Print), 1096-1178 (Online) (doi:https://doi.org/10.1016/j.pmpp.2018.06.003)

YMV

Nkere, Chukwuemeka K., Oyekanmi, Joshua O., Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Atiri, Gabriel I., Onyeka, Joseph, Maroya, Norbert G., Seal, Susan E. and Kumar, P. Lava (2018) Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP). Archives of Virology, 163 (4). pp. 1057-1061. ISSN 0304-8608 (Print), 1432-8798 (Online) (doi:https://doi.org/10.1007/s00705-018-3706-0)

Silva, Gonçalo ORCID: 0000-0001-5544-2947 , Bömer, Moritz ORCID: 0000-0003-1003-9622 , Nkere, Chukwuemeka, Kumar, P. Lava and Seal, Susan E. ORCID: 0000-0002-3952-1562 (2015) Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification. Journal of Virological Methods, 222. pp. 138-144. ISSN 0166-0934 (doi:https://doi.org/10.1016/j.jviromet.2015.06.011)

This list was generated on Thu Nov 21 16:48:02 2024 UTC.