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Munguti, Florence M., Kilalo, Dora C., Yegon, Hillary K., Macharia, Isaac, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Mwango’mbe, Agnes W., Nyaboga, Evans N. and Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947 (2024) Real-time reverse transcription recombinase polymerase amplification (RT-RPA) assay for detection of cassava brown streak viruses. Scientific Reports, 14:12438. pp. 1-11. ISSN 2045-2322 (Online) (doi:10.1038/s41598-024-62249-y)

Festus, Ruth, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562, Prempeh, Ruth, Quain, Marian D. and Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947 (2023) Improved Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) for the rapid and sensitive detection of Yam mosaic virus. Viruses, 15 (7):1592. pp. 1-17. ISSN 1999-4915 (Online) (doi:10.3390/v15071592)

Diouf, Mame Boucar, Festus, Ruth, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Guyader, Sébastien, Umber, Marie, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Teycheney, Pierre Yves (2022) Viruses of yams (Dioscorea spp.): current gaps in knowledge and future research directions to improve disease management. Viruses, 14 (9):1884. pp. 1-23. ISSN 1999-4915 (Online) (doi:10.3390/v14091884)

Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:10.3390/insects13060543)

Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Bömer, Moritz ORCID: https://orcid.org/0000-0003-1003-9622, Turaki, Aliyu A., Nkere, Chukwuemeka K., Kumar, P. Lava and Seal, Susan E. ORCID: https://orcid.org/0000-0002-3952-1562 (2022) Homing in on endogenous badnaviral elements: development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm. Frontiers in Plant Science, 13:846989. ISSN 1664-462X (Online) (doi:10.3389/fpls.2022.846989)

Kutnjak, Denis, Tamisier, Lucie, Adams, Ian, Boonham, Neil, Candresse, Thierry, Chiumenti, Michela, De Jonghe, Kris, Kreuze, Jan F., Lefebvre, Marie, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Malapi-Wight, Martha, Margaria, Paolo, Mavric Pleško, Irena, McGreig, Sam, Miozzi, Laura, Remenant, Benoit, Reynard, Jean-Sebastien, Rollin, Johan, Rott, Mike, Schumpp, Olivier, Massart, Sébastien and Haegeman, Annelies (2021) A primer on the analysis of high-throughput sequencing data for detection of plant viruses. Microorganisms, 9 (4):841. ISSN 2076-2607 (Online) (doi:10.3390/microorganisms9040841)

Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Tomlinson, Jenny, Onkokesung, Nawaporn, Sommer, Sarah, Mrisho, Latifa, Legg, James, Silva, Ian P., Gutierrez-Vazquez, Yaiza, Howard, Thomas P., Laverick, Alex, Hossain, Oindrila, Wei, Qingshan, M. Gold, Kaitlin and Boonham, Neil (2021) Plant pest surveillance: from satellites to molecules. Emerging Topics in Life Sciences, 5 (2). pp. 275-287. ISSN 2397-8554 (Print), 2397-8562 (Online) (doi:10.1042/ETLS20200300)

Bömer, Moritz ORCID: https://orcid.org/0000-0003-1003-9622, Turaki, Aliyu, Rathnayake, Ajith, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Lava Kumar, P. and Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 (2018) Rolling circle amplification to screen yam germplasm for badnavirus infections and to amplify and characterise novel badnavirus genomes. Bio-protocol, 8 (1). ISSN 2331-8325 (Online) (doi:10.21769/BioProtoc.2672)

Book Section

Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947 and Boonham, Neil (2025) Detection of cassava mosaic geminiviruses using Loop-Mediated Isothermal Amplification (LAMP). In: Zerbini, F.M., Fiallo-Olivé, E. and Navas-Castillo, J., (eds.) Geminiviruses: Methods in Molecular Biology. Methods in Molecular Biology ((MIMB), 2912 . Humana - Springer Protocols, Springer Nature, New York, NY, pp. 157-164. ISBN 978-1071644539; 978-1071644546 (doi:10.1007/978-1-0716-4454-6_13)

Sewe, Steven, Silva, Goncalo ORCID: https://orcid.org/0000-0001-5544-2947, Sicat, Juan Paolo, Seal, Susan ORCID: https://orcid.org/0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:10.1007/978-1-0716-2067-0_11)