Items where Subject is "QH426 Genetics"
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9-cis β-carotene
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
9-cis-β-carotene
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
acid betaine
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
aflatoxin
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
ageing
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
Aleyrodidae
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Sseruwagi, P. and Hillocks, Rory (2007) Mitochondrial DNA variability and development of a PCR diagnostic test for populations of the whitefly Bemisia afer (Priesner and Hosny). Molecular Biotechnology, 35 (1). pp. 31-40. ISSN 1073-6085 (doi:https://doi.org/10.1385/MB:35:1:31)
all-trans β-carotene
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
antibody responses
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
apple black spot
Passey, Thomas A. J. ORCID: 0000-0002-5678-2481 , Armitage, Andrew D. ORCID: 0000-0002-0610-763X and Xu, Xiangming (2018) Annotated draft genome sequence of the apple scab pathogen Venturia inaequalis. Microbiology Resource Announcements, 7 (12):e01062-18. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/mra.01062-18)
apple scab
Passey, Thomas A. J. ORCID: 0000-0002-5678-2481 , Armitage, Andrew D. ORCID: 0000-0002-0610-763X and Xu, Xiangming (2018) Annotated draft genome sequence of the apple scab pathogen Venturia inaequalis. Microbiology Resource Announcements, 7 (12):e01062-18. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/mra.01062-18)
ataxia-telangiectasia
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Britschgi, Christian, Joset, Pascal, Oneda, Beatrice, Schindler, Detlev ORCID: 0000-0003-2451-8165 , Meier, Urs R. and Rauch, Anita ORCID: 0000-0003-2930-3163 (2020) Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia–telangiectasia mutated gene). Molecular Genetics and Genomic Medicine, 8 (10):e1409. ISSN 2324-9269 (Online) (doi:https://doi.org/10.1002/mgg3.1409)
ATM
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Britschgi, Christian, Joset, Pascal, Oneda, Beatrice, Schindler, Detlev ORCID: 0000-0003-2451-8165 , Meier, Urs R. and Rauch, Anita ORCID: 0000-0003-2930-3163 (2020) Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia–telangiectasia mutated gene). Molecular Genetics and Genomic Medicine, 8 (10):e1409. ISSN 2324-9269 (Online) (doi:https://doi.org/10.1002/mgg3.1409)
autoimmunity
Hudec, Michael, Jurícková, Iva, Riegerová, Kamila, Ovsepian, Saak, Cerná, Marie and O’Leary, Valerie (2022) Enhanced extracellular transfer of HLA-DQ activates CD3+ lymphocytes towards compromised Treg induction in celiac disease. International Journal of Molecular Sciences, 23 (11):6102. ISSN 1661-6596 (doi:https://doi.org/10.3390/ijms23116102)
Avicenna
Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Asadollahi, Hamid (2013) Avicenna’s view on medical genetics. Genetics in Medicine, 15 (5). pp. 410-411. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/gim.2013.27)
avirulence
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
axon guidance
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2009) A bioinformatic and in situ screen for novel axon guidance molecules. In: Mechanisms of Development. Elsevier Ireland Ltd, S192-S192. ISSN 0925-4773 (doi:https://doi.org/10.1016/j.mod.2009.06.466)
Cate, Marie-Sophie, Alsbury, Samantha, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] Mud is required for axon guidance at the midline of the Drosophila central nervous system. Journal of Neurogenetics, 24 (S1). p. 81. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
b12 nutrients
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
b6 vitamin
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
bacterial canker
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
Bayoud disease
Khayi, Slimane ORCID: 0000-0001-8033-2117 , Armitage, Andrew ORCID: 0000-0002-0610-763X , El Guilli, Mohammed, Meftah Kadmiri, Issam ORCID: 0000-0003-1067-1652 , Lahlali, Rachid, Fokar, Mohamed and Mentag, Rachid ORCID: 0000-0002-2040-637X (2021) Complete mitochondrial genome and phylogeny of the causal agent of Bayoud disease on date palm, Fusarium oxysporum f. sp. albedinis. Mitochondrial DNA Part B, 6 (10). pp. 3059-3061. ISSN 2380-2359 (Print), 2380-2359 (Online) (doi:https://doi.org/10.1080/23802359.2021.1978894)
Bemisia tabaci
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)
biochemistry
Bartlett, Terence James (1992) Molecular properties of aspartate transcarbamoylase and related enaymes from wheat. PhD thesis, University of Greenwich.
biofuels
Vega-Estévez, Samuel, Armitage, Andrew ORCID: 0000-0002-0610-763X , Bates, Helen J., Harrison, Richard J. and Buscaino, Alessia ORCID: 0000-0002-1704-3168 (2021) The genome of the CTG(Ser1) yeast Scheffersomyces stipitis is plastic. mBio, 12 (5). ISSN 2150-7511 (Print), 2150-7511 (Online) (doi:https://doi.org/10.1128/mBio.01871-21)
biogeography
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)
bioinformatics
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)
biological markers
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
biological species
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
biotechnological products
Pawlowski, Mark ORCID: 0000-0002-5473-5809 (2009) Property in body parts and products of the human body. Liverpool Law Review, 30 (1). pp. 35-55. ISSN 0144-932X (Print), 1572-8625 (Online) (doi:https://doi.org/10.1007/s10991-009-9052-2)
biotype
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
blue LED
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
body parts
Pawlowski, Mark ORCID: 0000-0002-5473-5809 (2009) Property in body parts and products of the human body. Liverpool Law Review, 30 (1). pp. 35-55. ISSN 0144-932X (Print), 1572-8625 (Online) (doi:https://doi.org/10.1007/s10991-009-9052-2)
body weight
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
botany
Bartlett, Terence James (1992) Molecular properties of aspartate transcarbamoylase and related enaymes from wheat. PhD thesis, University of Greenwich.
breast cancer
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Britschgi, Christian, Joset, Pascal, Oneda, Beatrice, Schindler, Detlev ORCID: 0000-0003-2451-8165 , Meier, Urs R. and Rauch, Anita ORCID: 0000-0003-2930-3163 (2020) Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia–telangiectasia mutated gene). Molecular Genetics and Genomic Medicine, 8 (10):e1409. ISSN 2324-9269 (Online) (doi:https://doi.org/10.1002/mgg3.1409)
Busco
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
C5orf42
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Strauss, Justin E, Zenker, Martin, Beuing, Oliver ORCID: 0000-0001-8033-063X , Edvardson, Simon, Elpeleg, Orly, Strom, Tim M, Joset, Pascal, Niedrist, Dunja, Otte, Christine, Oneda, Beatrice, Boonsawat, Paranchai, Azzarello-Burri, Silvia, Bartholdi, Deborah, Papik, Michael, Zweier, Markus, Haas, Cordula, Ekici, Arif B ORCID: 0000-0001-6099-7066 , Baumer, Alessandra, Boltshauser, Eugen, Steindl, Katharina, Nothnagel, Michael ORCID: 0000-0001-8305-7114 , Schinzel, Albert, Stoeckli, Esther T and Rauch, Anita ORCID: 0000-0003-2930-3163 (2018) Clinical and experimental evidence suggest a link between KIF7 and C5orf42-related ciliopathies through Sonic Hedgehog signaling. European Journal of Human Genetics, 26 (2). pp. 197-209. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/s41431-017-0019-9)
Cancer Biology
Pecorino, Lauren, Grose, Richard and Uysal-Onganer, Pinar (2018) Workshops for subject-specific teachers’ training: A case study for teaching cancer biology. Compass: The Journal of Learning and Teaching at the University of Greenwich, 11 (2). ISSN 2044-0081 (doi:https://doi.org/10.21100/compass.v11i2.749)
carbon cholinedna
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
carotenoids
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
Cassava diseases
Otti, Gerald, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Kimata, Bernadetha, Mkamillo, Geoffrey, Kumar, Lava, Tomlins, Keith and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2016) High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants. Journal Of Applied Microbiology (Online first), 120 (5). pp. 1346-1356. ISSN 1364-5072 (Print), 1365-2672 (Online) (doi:https://doi.org/10.1111/jam.13043)
cells
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
chemovar
Cockram, James, Hill, Colin, Burns, Corrinne, Arroo, Randoph R. J., Woolley, Jack G., Flockart, Ian, Robinson, Trevor, Atkinson, Christopher J., Davies, Michael J., Dungey, Nigel, Greenland, Andy J., Smith, Lydia L. M. J. and Bentley, Steven (2012) Screening a diverse collection of Artemisia annua germplasm accessions for the antimalarial compound, artemisinin. Plant Genetic Resources, 10 (02). pp. 152-154. ISSN 1479-2621 (Print), 1479-263X (Online) (doi:https://doi.org/10.1017/S1479262112000159)
chronic pain
Ovsepian, Saak and Waxman, Stephen (2023) Gene therapy for chronic pain: emerging opportunities in target-rich peripheral nociceptors. Nature Review Neuroscience, 12 (1):1. pp. 252-265. ISSN 1471-003X (Print), 1471-0048 (Online) (doi:https://doi.org/10.1038/s41583-022-00673-7)
ciliopathies
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Strauss, Justin E, Zenker, Martin, Beuing, Oliver ORCID: 0000-0001-8033-063X , Edvardson, Simon, Elpeleg, Orly, Strom, Tim M, Joset, Pascal, Niedrist, Dunja, Otte, Christine, Oneda, Beatrice, Boonsawat, Paranchai, Azzarello-Burri, Silvia, Bartholdi, Deborah, Papik, Michael, Zweier, Markus, Haas, Cordula, Ekici, Arif B ORCID: 0000-0001-6099-7066 , Baumer, Alessandra, Boltshauser, Eugen, Steindl, Katharina, Nothnagel, Michael ORCID: 0000-0001-8305-7114 , Schinzel, Albert, Stoeckli, Esther T and Rauch, Anita ORCID: 0000-0003-2930-3163 (2018) Clinical and experimental evidence suggest a link between KIF7 and C5orf42-related ciliopathies through Sonic Hedgehog signaling. European Journal of Human Genetics, 26 (2). pp. 197-209. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/s41431-017-0019-9)
circadian
Weinrich, Tobias, Hoh Kam, Jaimie, Ferrara, Bill T. ORCID: 0000-0002-2163-4032 , Thompson, Elinor P. ORCID: 0000-0002-6434-9290 , Mitrofanis, John and Jeffery, Glen (2019) A day in the life of mitochondria reveals shifting workloads. Scientific Reports, 9:13898. ISSN 2045-2322 (Print), 2041-1723 (Online) (doi:https://doi.org/10.1038/s41598-019-48383-y)
cladogenesis
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
clinical genetics
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Joset, Pascal, Azzarello-Burri, Silvia, Bartholdi, Deborah, Steindl, Katharina, Vincent, Marie, Cobilanschi, Joana, Sticht, Heinrich, Baldinger, Rosa, Reissmann, Regina, Sudholt, Irene, Thiel, Christian T, Ekici, Arif B, Reis, André, Bijlsma, Emilia K, Andrieux, Joris, Dieux, Anne, FitzPatrick, David, Ritter, Susanne, Baumer, Alessandra, Latal, Beatrice, Plecko, Barbara, Jenni, Oskar G and Rauch, Anita (2014) The clinical significance of small copy number variants in neurodevelopmental disorders. Journal of Medical Genetics, 51 (10). pp. 677-688. ISSN 0022-2593 (Print), 1468-6244 (Online) (doi:https://doi.org/10.1136/jmedgenet-2014-102588)
cognitive decline
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
colorectal cancer
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
comparative genomics
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
contraception
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
copy-number
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Joset, Pascal, Azzarello-Burri, Silvia, Bartholdi, Deborah, Steindl, Katharina, Vincent, Marie, Cobilanschi, Joana, Sticht, Heinrich, Baldinger, Rosa, Reissmann, Regina, Sudholt, Irene, Thiel, Christian T, Ekici, Arif B, Reis, André, Bijlsma, Emilia K, Andrieux, Joris, Dieux, Anne, FitzPatrick, David, Ritter, Susanne, Baumer, Alessandra, Latal, Beatrice, Plecko, Barbara, Jenni, Oskar G and Rauch, Anita (2014) The clinical significance of small copy number variants in neurodevelopmental disorders. Journal of Medical Genetics, 51 (10). pp. 677-688. ISSN 0022-2593 (Print), 1468-6244 (Online) (doi:https://doi.org/10.1136/jmedgenet-2014-102588)
CRISPR-Cas9
Krumm, Laura, Pozner, Tatyana, Kaindl, Johanna, Regensburger, Martin, Günther, Claudia, Turan, Soeren, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Rauch, Anita and Winner, Beate (2021) Generation and characterization of an endogenously tagged SPG11-human iPSC line by CRISPR/Cas9 mediated knock-in. Stem Cell Research, 56:102520. ISSN 1873-5061 (doi:https://doi.org/10.1016/j.scr.2021.102520)
CTG clade yeast
Vega-Estévez, Samuel, Armitage, Andrew ORCID: 0000-0002-0610-763X , Bates, Helen J., Harrison, Richard J. and Buscaino, Alessia ORCID: 0000-0002-1704-3168 (2021) The genome of the CTG(Ser1) yeast Scheffersomyces stipitis is plastic. mBio, 12 (5). ISSN 2150-7511 (Print), 2150-7511 (Online) (doi:https://doi.org/10.1128/mBio.01871-21)
Cytochrome oxidase
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
cytochromoe oxidase I gene
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Sseruwagi, P. and Hillocks, Rory (2007) Mitochondrial DNA variability and development of a PCR diagnostic test for populations of the whitefly Bemisia afer (Priesner and Hosny). Molecular Biotechnology, 35 (1). pp. 31-40. ISSN 1073-6085 (doi:https://doi.org/10.1385/MB:35:1:31)
cytology
Bartlett, Terence James (1992) Molecular properties of aspartate transcarbamoylase and related enaymes from wheat. PhD thesis, University of Greenwich.
date palm
Khayi, Slimane ORCID: 0000-0001-8033-2117 , Armitage, Andrew ORCID: 0000-0002-0610-763X , El Guilli, Mohammed, Meftah Kadmiri, Issam ORCID: 0000-0003-1067-1652 , Lahlali, Rachid, Fokar, Mohamed and Mentag, Rachid ORCID: 0000-0002-2040-637X (2021) Complete mitochondrial genome and phylogeny of the causal agent of Bayoud disease on date palm, Fusarium oxysporum f. sp. albedinis. Mitochondrial DNA Part B, 6 (10). pp. 3059-3061. ISSN 2380-2359 (Print), 2380-2359 (Online) (doi:https://doi.org/10.1080/23802359.2021.1978894)
developmental
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Joset, Pascal, Azzarello-Burri, Silvia, Bartholdi, Deborah, Steindl, Katharina, Vincent, Marie, Cobilanschi, Joana, Sticht, Heinrich, Baldinger, Rosa, Reissmann, Regina, Sudholt, Irene, Thiel, Christian T, Ekici, Arif B, Reis, André, Bijlsma, Emilia K, Andrieux, Joris, Dieux, Anne, FitzPatrick, David, Ritter, Susanne, Baumer, Alessandra, Latal, Beatrice, Plecko, Barbara, Jenni, Oskar G and Rauch, Anita (2014) The clinical significance of small copy number variants in neurodevelopmental disorders. Journal of Medical Genetics, 51 (10). pp. 677-688. ISSN 0022-2593 (Print), 1468-6244 (Online) (doi:https://doi.org/10.1136/jmedgenet-2014-102588)
developmental biology
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2009) A bioinformatic and in situ screen for novel axon guidance molecules. In: Mechanisms of Development. Elsevier Ireland Ltd, S192-S192. ISSN 0925-4773 (doi:https://doi.org/10.1016/j.mod.2009.06.466)
diagnostics
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Joset, Pascal, Azzarello-Burri, Silvia, Bartholdi, Deborah, Steindl, Katharina, Vincent, Marie, Cobilanschi, Joana, Sticht, Heinrich, Baldinger, Rosa, Reissmann, Regina, Sudholt, Irene, Thiel, Christian T, Ekici, Arif B, Reis, André, Bijlsma, Emilia K, Andrieux, Joris, Dieux, Anne, FitzPatrick, David, Ritter, Susanne, Baumer, Alessandra, Latal, Beatrice, Plecko, Barbara, Jenni, Oskar G and Rauch, Anita (2014) The clinical significance of small copy number variants in neurodevelopmental disorders. Journal of Medical Genetics, 51 (10). pp. 677-688. ISSN 0022-2593 (Print), 1468-6244 (Online) (doi:https://doi.org/10.1136/jmedgenet-2014-102588)
diversity
Khayi, Slimane ORCID: 0000-0001-8033-2117 , Armitage, Andrew ORCID: 0000-0002-0610-763X , El Guilli, Mohammed, Meftah Kadmiri, Issam ORCID: 0000-0003-1067-1652 , Lahlali, Rachid, Fokar, Mohamed and Mentag, Rachid ORCID: 0000-0002-2040-637X (2021) Complete mitochondrial genome and phylogeny of the causal agent of Bayoud disease on date palm, Fusarium oxysporum f. sp. albedinis. Mitochondrial DNA Part B, 6 (10). pp. 3059-3061. ISSN 2380-2359 (Print), 2380-2359 (Online) (doi:https://doi.org/10.1080/23802359.2021.1978894)
THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM; THE UNIVERSITY OF GREENWICH (2018) ALGAL STRAINS. WO/2018/141978.
DNA methylation
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
DNA transposons
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)
drosophila
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2009) A bioinformatic and in situ screen for novel axon guidance molecules. In: Mechanisms of Development. Elsevier Ireland Ltd, S192-S192. ISSN 0925-4773 (doi:https://doi.org/10.1016/j.mod.2009.06.466)
Cate, Marie-Sophie, Alsbury, Samantha, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] Mud is required for axon guidance at the midline of the Drosophila central nervous system. Journal of Neurogenetics, 24 (S1). p. 81. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
Drosophila melanogaster
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
Dunaliella
THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM; THE UNIVERSITY OF GREENWICH (2018) ALGAL STRAINS. WO/2018/141978.
Dunaliella salina
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
eel
Politis, Sebastian N, Benini, Elisa, Miest, Joanna Junack ORCID: 0000-0003-2534-0530 , Engrola, Sofia, Sorensen, Sune, Syropoulou, Elisavet, Butts, Ian AE and Tomkiewicz, Jonna (2023) First assessment of prebiotics, probiotics, and synbiotics affecting survival, growth, and gene expression of European eel (Anguilla anguilla) larvae. Aquaculture Research, 2023:1260967. pp. 1-13. ISSN 1355-557X (Print), 1365-2109 (Online) (doi:https://doi.org/10.1155/2023/1260967)
endosymbiont
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
epigenetics
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
Silver, Matt J, Kessler, Noah J, Hennig, Branwen J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Laritsky, Eleonora, Baker, Maria S, Coarfa, Cristian, Hernandez-Vargas, Hector, Castelino, Jovita M, Routledge, Michael N, Gong, Yun Yun, Herceg, Zdenko, Lee, Yong Sun, Lee, Kwanbok, Moore, Sophie E, Fulford, Anthony J, Prentice, Andrew M and Waterland, Robert A (2015) Independent genomewide screens identify the tumor suppressor VTRNA2-1 as a human epiallele responsive to periconceptional environment. Genome Biology, 16 (1):118. ISSN 1465-6906 (Print), 1474-760X (Online) (doi:https://doi.org/10.1186/s13059-015-0660-y)
Silver, Matt J., Corbin, Karen D., Hellenthal, Garrett, da Costa, Kerry-Ann, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E., Owen, Jennifer, Prentice, Andrew M., Hennig, Branwen J. and Zeisel, Steven H. (2015) Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort. FASEB Journal, 29 (8). pp. 3426-3435. ISSN 0892-6638 (Print), 1530-6860 (Online) (doi:https://doi.org/10.1096/fj.15-271056)
Ethiopia
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
evolution and adaptation
Behere, Gajanan T., Tay, Wee Tek, Russell, Derek A., Heckel, David G., Appleton, Belinda R., Kranthi, Keshav R. and Batterham, Philip (2007) Mitochondrial DNA analysis of field populations of Helicoverpa armigera (Lepidoptera: Noctuidae) and of its relationship to H. zea. BMC Evolutionary Biology, 7 (117). pp. 1-10. ISSN 1471-2148 (doi:https://doi.org/10.1186/1471-2148-7-117)
exosome
Hudec, Michael, Jurícková, Iva, Riegerová, Kamila, Ovsepian, Saak, Cerná, Marie and O’Leary, Valerie (2022) Enhanced extracellular transfer of HLA-DQ activates CD3+ lymphocytes towards compromised Treg induction in celiac disease. International Journal of Molecular Sciences, 23 (11):6102. ISSN 1661-6596 (doi:https://doi.org/10.3390/ijms23116102)
Fastqc
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
fructose
Christides, Tatiana and Sharp, Paul (2013) Action of iron and fructose on gene expression in human liver cells. In: BioIron Abstracts: American Journal of Hematology. Wiley-Blackwell, London, UK, E232-E232. ISSN 1096-8652 (doi:https://doi.org/10.1002/ajh.23453)
Fusarium oxysporum
Khayi, Slimane ORCID: 0000-0001-8033-2117 , Armitage, Andrew ORCID: 0000-0002-0610-763X , El Guilli, Mohammed, Meftah Kadmiri, Issam ORCID: 0000-0003-1067-1652 , Lahlali, Rachid, Fokar, Mohamed and Mentag, Rachid ORCID: 0000-0002-2040-637X (2021) Complete mitochondrial genome and phylogeny of the causal agent of Bayoud disease on date palm, Fusarium oxysporum f. sp. albedinis. Mitochondrial DNA Part B, 6 (10). pp. 3059-3061. ISSN 2380-2359 (Print), 2380-2359 (Online) (doi:https://doi.org/10.1080/23802359.2021.1978894)
Gambia
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
Silver, Matt J, Kessler, Noah J, Hennig, Branwen J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Laritsky, Eleonora, Baker, Maria S, Coarfa, Cristian, Hernandez-Vargas, Hector, Castelino, Jovita M, Routledge, Michael N, Gong, Yun Yun, Herceg, Zdenko, Lee, Yong Sun, Lee, Kwanbok, Moore, Sophie E, Fulford, Anthony J, Prentice, Andrew M and Waterland, Robert A (2015) Independent genomewide screens identify the tumor suppressor VTRNA2-1 as a human epiallele responsive to periconceptional environment. Genome Biology, 16 (1):118. ISSN 1465-6906 (Print), 1474-760X (Online) (doi:https://doi.org/10.1186/s13059-015-0660-y)
Silver, Matt J., Corbin, Karen D., Hellenthal, Garrett, da Costa, Kerry-Ann, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E., Owen, Jennifer, Prentice, Andrew M., Hennig, Branwen J. and Zeisel, Steven H. (2015) Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort. FASEB Journal, 29 (8). pp. 3426-3435. ISSN 0892-6638 (Print), 1530-6860 (Online) (doi:https://doi.org/10.1096/fj.15-271056)
GEBV
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
Geminivirus diversity
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
gender transition
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
gene flow
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
gene therapy
Ovsepian, Saak and Waxman, Stephen (2023) Gene therapy for chronic pain: emerging opportunities in target-rich peripheral nociceptors. Nature Review Neuroscience, 12 (1):1. pp. 252-265. ISSN 1471-003X (Print), 1471-0048 (Online) (doi:https://doi.org/10.1038/s41583-022-00673-7)
genetic algorithm
Sengupta, Shampa, Pal, Kumud Ranjan and Garg, Vivek ORCID: 0000-0002-8515-4759 (2022) Design of an intelligent system for diabetes prediction by integrating rough set theory and genetic algorithm. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor Francis, Boca Raton, pp. 157-172. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
genetic analysis
Popp, Bernt ORCID: 0000-0002-3679-1081 , Krumbiegel, Mandy, Grosch, Janina, Sommer, Annika, Uebe, Steffen, Kohl, Zacharias ORCID: 0000-0002-4147-8866 , Plötz, Sonja, Farrell, Michaela, Trautmann, Udo, Kraus, Cornelia, Ekici, Arif B. ORCID: 0000-0001-6099-7066 , Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Regensburger, Martin ORCID: 0000-0002-2172-7386 , Günther, Katharina, Rauch, Anita, Edenhofer, Frank, Winkler, Jürgen, Winner, Beate and Reis, André ORCID: 0000-0002-6301-6363 (2018) Need for high-resolution genetic analysis in iPSC: results and lessons from the ForIPS consortium. Scientific reports, 8:17201. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-018-35506-0)
genetic counseling
Boonsawat, Paranchai, Joset, Pascal, Steindl, Katharina, Oneda, Beatrice, Gogoll, Laura, Azzarello-Burri, Silvia, Sheth, Frenny, Datar, Chaitanya, Verma, Ishwar C., Puri, Ratna Dua, Zollino, Marcella, Bachmann-Gagescu, Ruxandra, Niedrist, Dunja, Papik, Michael, Figueiro-Silva, Joana, Masood, Rahim, Zweier, Markus, Kraemer, Dennis, Lincoln, Sharyn, Rodan, Lance, Passemard, Sandrine, Drunat, Séverine, Verloes, Alain, Horn, Anselm H.C., Sticht, Heinrich, Steinfeld, Robert, Plecko, Barbara, Latal, Beatrice, Jenni, Oskar, Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Rauch, Anita (2019) Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly. Genetics in Medicine, 21 (9). pp. 2043-2058. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/s41436-019-0464-7)
genetic differentiation
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
genetic diversity
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Sseruwagi, P. and Hillocks, Rory (2007) Mitochondrial DNA variability and development of a PCR diagnostic test for populations of the whitefly Bemisia afer (Priesner and Hosny). Molecular Biotechnology, 35 (1). pp. 31-40. ISSN 1073-6085 (doi:https://doi.org/10.1385/MB:35:1:31)
genetic material
Pawlowski, Mark ORCID: 0000-0002-5473-5809 (2009) Property in body parts and products of the human body. Liverpool Law Review, 30 (1). pp. 35-55. ISSN 0144-932X (Print), 1572-8625 (Online) (doi:https://doi.org/10.1007/s10991-009-9052-2)
genetic programming
Zhao, Jun, Kearney, Garrett and Soper, Alan ORCID: 0000-0002-0901-9803 (1996) Emotional expression classification by genetic programming. In: Genetic Programming 1996 Conference (GP-96), 28-31 July 1996, Stanford University, United States. (Unpublished)
genetic variation
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
genetics
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] A bioinformatic and in situ screen for novel axon guidance molecules. Journal of Neurogenetics, 24 (S1). p. 69. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2009) A bioinformatic and in situ screen for novel axon guidance molecules. In: Mechanisms of Development. Elsevier Ireland Ltd, S192-S192. ISSN 0925-4773 (doi:https://doi.org/10.1016/j.mod.2009.06.466)
Bartlett, Terence James (1992) Molecular properties of aspartate transcarbamoylase and related enaymes from wheat. PhD thesis, University of Greenwich.
Cate, Marie-Sophie, Alsbury, Samantha, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] Mud is required for axon guidance at the midline of the Drosophila central nervous system. Journal of Neurogenetics, 24 (S1). p. 81. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
genome assembly
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
genome plasticity
Vega-Estévez, Samuel, Armitage, Andrew ORCID: 0000-0002-0610-763X , Bates, Helen J., Harrison, Richard J. and Buscaino, Alessia ORCID: 0000-0002-1704-3168 (2021) The genome of the CTG(Ser1) yeast Scheffersomyces stipitis is plastic. mBio, 12 (5). ISSN 2150-7511 (Print), 2150-7511 (Online) (doi:https://doi.org/10.1128/mBio.01871-21)
genome-wide
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Joset, Pascal, Azzarello-Burri, Silvia, Bartholdi, Deborah, Steindl, Katharina, Vincent, Marie, Cobilanschi, Joana, Sticht, Heinrich, Baldinger, Rosa, Reissmann, Regina, Sudholt, Irene, Thiel, Christian T, Ekici, Arif B, Reis, André, Bijlsma, Emilia K, Andrieux, Joris, Dieux, Anne, FitzPatrick, David, Ritter, Susanne, Baumer, Alessandra, Latal, Beatrice, Plecko, Barbara, Jenni, Oskar G and Rauch, Anita (2014) The clinical significance of small copy number variants in neurodevelopmental disorders. Journal of Medical Genetics, 51 (10). pp. 677-688. ISSN 0022-2593 (Print), 1468-6244 (Online) (doi:https://doi.org/10.1136/jmedgenet-2014-102588)
genomic instability
Vega-Estévez, Samuel, Armitage, Andrew ORCID: 0000-0002-0610-763X , Bates, Helen J., Harrison, Richard J. and Buscaino, Alessia ORCID: 0000-0002-1704-3168 (2021) The genome of the CTG(Ser1) yeast Scheffersomyces stipitis is plastic. mBio, 12 (5). ISSN 2150-7511 (Print), 2150-7511 (Online) (doi:https://doi.org/10.1128/mBio.01871-21)
genotypes
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Sseruwagi, P. and Hillocks, Rory (2007) Mitochondrial DNA variability and development of a PCR diagnostic test for populations of the whitefly Bemisia afer (Priesner and Hosny). Molecular Biotechnology, 35 (1). pp. 31-40. ISSN 1073-6085 (doi:https://doi.org/10.1385/MB:35:1:31)
gluten
Hudec, Michael, Jurícková, Iva, Riegerová, Kamila, Ovsepian, Saak, Cerná, Marie and O’Leary, Valerie (2022) Enhanced extracellular transfer of HLA-DQ activates CD3+ lymphocytes towards compromised Treg induction in celiac disease. International Journal of Molecular Sciences, 23 (11):6102. ISSN 1661-6596 (doi:https://doi.org/10.3390/ijms23116102)
glycolysis
Weinrich, Tobias, Hoh Kam, Jaimie, Ferrara, Bill T. ORCID: 0000-0002-2163-4032 , Thompson, Elinor P. ORCID: 0000-0002-6434-9290 , Mitrofanis, John and Jeffery, Glen (2019) A day in the life of mitochondria reveals shifting workloads. Scientific Reports, 9:13898. ISSN 2045-2322 (Print), 2041-1723 (Online) (doi:https://doi.org/10.1038/s41598-019-48383-y)
growth
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
GWAS
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
haploinsufficiency
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Zweier, Markus, Gogoll, Laura, Schiffmann, Raphael, Sticht, Heinrich ORCID: 0000-0001-5644-045X , Steindl, Katharina and Rauch, Anita (2017) Genotype-phenotype evaluation of MED13L defects in the light of a novel truncating and a recurrent missense mutation. European Journal of Medical Genetics, 60 (9). pp. 451-464. ISSN 1769-7212 (doi:https://doi.org/10.1016/j.ejmg.2017.06.004)
haplotype
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
HCT116
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
healthcare
Tripathi, Anuj, Garg, Vivek ORCID: 0000-0002-8515-4759 , Vargis, Binu Kuriakose and Agrawal, Chaitanya P. (2023) Blockchain-enabled secured medical supply chain management. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor & Francis, Boca Raton, pp. 189-210. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
healthy ageing
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
heart defects
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Sheth, Frenny, Azzarello-Burri, Silvia, Baldinger, Rosa, Joset, Pascal, Latal, Beatrice, Knirsch, Walter, Desai, Soaham, Baumer, Alessandra, Houge, Gunnar, Andrieux, Joris and Rauch, Anita (2013) Dosage changes of MED13L further delineate its role in congenital heart defects and intellectual disability. European Journal of Human Genetics, 21 (10). pp. 1100-1104. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/ejhg.2013.17)
HEK293T cells
Begemann, Anaïs, Acuña, Mario A., Zweier, Markus, Vincent, Marie, Steindl, Katharina, Bachmann-Gagescu, Ruxandra, Hackenberg, Annette, Abela, Lucia, Plecko, Barbara, Kroell-Seger, Judith, Baumer, Alessandra, Yamakawa, Kazuhiro, Inoue, Yushi, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Sticht, Heinrich, Zeilhofer, Hanns Ulrich and Rauch, Anita (2019) Further corroboration of distinct functional features in SCN2A variants causing intellectual disability or epileptic phenotypes. Molecular Medicine, 25 (1). ISSN 1076-1551 (Print), 1528-3658 (Online) (doi:https://doi.org/10.1186/s10020-019-0073-6)
Higher Education Academy
Pecorino, Lauren, Grose, Richard and Uysal-Onganer, Pinar (2018) Workshops for subject-specific teachers’ training: A case study for teaching cancer biology. Compass: The Journal of Learning and Teaching at the University of Greenwich, 11 (2). ISSN 2044-0081 (doi:https://doi.org/10.21100/compass.v11i2.749)
history
Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Asadollahi, Hamid (2013) Avicenna’s view on medical genetics. Genetics in Medicine, 15 (5). pp. 410-411. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/gim.2013.27)
horizontal genes
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
hormone replacement therapy
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
horticulture
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)
host specialization
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
human body
Pawlowski, Mark ORCID: 0000-0002-5473-5809 (2009) Property in body parts and products of the human body. Liverpool Law Review, 30 (1). pp. 35-55. ISSN 0144-932X (Print), 1572-8625 (Online) (doi:https://doi.org/10.1007/s10991-009-9052-2)
hypomorphic variants
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Britschgi, Christian, Joset, Pascal, Oneda, Beatrice, Schindler, Detlev ORCID: 0000-0003-2451-8165 , Meier, Urs R. and Rauch, Anita ORCID: 0000-0003-2930-3163 (2020) Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia–telangiectasia mutated gene). Molecular Genetics and Genomic Medicine, 8 (10):e1409. ISSN 2324-9269 (Online) (doi:https://doi.org/10.1002/mgg3.1409)
I gene
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
Illumina adapters
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
in utero exposure
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
indigenous chickens
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
infection
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)
infectious diseases
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
inspirations
Asadollahi, Reza ORCID: 0000-0002-1497-0564 (2016) Inspirations in medical genetics. Journal of Medical Biography, 24 (1). pp. 138-140. ISSN 0967-7720 (Print), 1758-1087 (Online) (doi:https://doi.org/10.1177/0967772014525097)
intellectual disability
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Sheth, Frenny, Azzarello-Burri, Silvia, Baldinger, Rosa, Joset, Pascal, Latal, Beatrice, Knirsch, Walter, Desai, Soaham, Baumer, Alessandra, Houge, Gunnar, Andrieux, Joris and Rauch, Anita (2013) Dosage changes of MED13L further delineate its role in congenital heart defects and intellectual disability. European Journal of Human Genetics, 21 (10). pp. 1100-1104. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/ejhg.2013.17)
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Zweier, Markus, Gogoll, Laura, Schiffmann, Raphael, Sticht, Heinrich ORCID: 0000-0001-5644-045X , Steindl, Katharina and Rauch, Anita (2017) Genotype-phenotype evaluation of MED13L defects in the light of a novel truncating and a recurrent missense mutation. European Journal of Medical Genetics, 60 (9). pp. 451-464. ISSN 1769-7212 (doi:https://doi.org/10.1016/j.ejmg.2017.06.004)
intelligent system
Sengupta, Shampa, Pal, Kumud Ranjan and Garg, Vivek ORCID: 0000-0002-8515-4759 (2022) Design of an intelligent system for diabetes prediction by integrating rough set theory and genetic algorithm. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor Francis, Boca Raton, pp. 157-172. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
iPSC
Krumm, Laura, Pozner, Tatyana, Kaindl, Johanna, Regensburger, Martin, Günther, Claudia, Turan, Soeren, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Rauch, Anita and Winner, Beate (2021) Generation and characterization of an endogenously tagged SPG11-human iPSC line by CRISPR/Cas9 mediated knock-in. Stem Cell Research, 56:102520. ISSN 1873-5061 (doi:https://doi.org/10.1016/j.scr.2021.102520)
Popp, Bernt ORCID: 0000-0002-3679-1081 , Krumbiegel, Mandy, Grosch, Janina, Sommer, Annika, Uebe, Steffen, Kohl, Zacharias ORCID: 0000-0002-4147-8866 , Plötz, Sonja, Farrell, Michaela, Trautmann, Udo, Kraus, Cornelia, Ekici, Arif B. ORCID: 0000-0001-6099-7066 , Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Regensburger, Martin ORCID: 0000-0002-2172-7386 , Günther, Katharina, Rauch, Anita, Edenhofer, Frank, Winkler, Jürgen, Winner, Beate and Reis, André ORCID: 0000-0002-6301-6363 (2018) Need for high-resolution genetic analysis in iPSC: results and lessons from the ForIPS consortium. Scientific reports, 8:17201. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-018-35506-0)
iron
Christides, Tatiana and Sharp, Paul (2013) Action of iron and fructose on gene expression in human liver cells. In: BioIron Abstracts: American Journal of Hematology. Wiley-Blackwell, London, UK, E232-E232. ISSN 1096-8652 (doi:https://doi.org/10.1002/ajh.23453)
Iron superoxide dismutase
Temperton, Nigel ORCID: 0000-0002-7978-3815 , Wilkinson, Shane R. and Kelly, John M. (1996) Cloning of an Fe-superoxide dismutase gene homologue from Trypanosoma cruzi. Molecular and Biochemical Parasitology, 76 (1-2). pp. 339-343. ISSN 0166-6851 (doi:https://doi.org/10.1016/0166-6851(95)02553-7)
isomerisation
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
KIF7
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Strauss, Justin E, Zenker, Martin, Beuing, Oliver ORCID: 0000-0001-8033-063X , Edvardson, Simon, Elpeleg, Orly, Strom, Tim M, Joset, Pascal, Niedrist, Dunja, Otte, Christine, Oneda, Beatrice, Boonsawat, Paranchai, Azzarello-Burri, Silvia, Bartholdi, Deborah, Papik, Michael, Zweier, Markus, Haas, Cordula, Ekici, Arif B ORCID: 0000-0001-6099-7066 , Baumer, Alessandra, Boltshauser, Eugen, Steindl, Katharina, Nothnagel, Michael ORCID: 0000-0001-8305-7114 , Schinzel, Albert, Stoeckli, Esther T and Rauch, Anita ORCID: 0000-0003-2930-3163 (2018) Clinical and experimental evidence suggest a link between KIF7 and C5orf42-related ciliopathies through Sonic Hedgehog signaling. European Journal of Human Genetics, 26 (2). pp. 197-209. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/s41431-017-0019-9)
KRAS
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
leaf beetle
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
lifespan
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
light intensity
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
major histocompatibility complex II
Hudec, Michael, Jurícková, Iva, Riegerová, Kamila, Ovsepian, Saak, Cerná, Marie and O’Leary, Valerie (2022) Enhanced extracellular transfer of HLA-DQ activates CD3+ lymphocytes towards compromised Treg induction in celiac disease. International Journal of Molecular Sciences, 23 (11):6102. ISSN 1661-6596 (doi:https://doi.org/10.3390/ijms23116102)
MCPH
Boonsawat, Paranchai, Joset, Pascal, Steindl, Katharina, Oneda, Beatrice, Gogoll, Laura, Azzarello-Burri, Silvia, Sheth, Frenny, Datar, Chaitanya, Verma, Ishwar C., Puri, Ratna Dua, Zollino, Marcella, Bachmann-Gagescu, Ruxandra, Niedrist, Dunja, Papik, Michael, Figueiro-Silva, Joana, Masood, Rahim, Zweier, Markus, Kraemer, Dennis, Lincoln, Sharyn, Rodan, Lance, Passemard, Sandrine, Drunat, Séverine, Verloes, Alain, Horn, Anselm H.C., Sticht, Heinrich, Steinfeld, Robert, Plecko, Barbara, Latal, Beatrice, Jenni, Oskar, Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Rauch, Anita (2019) Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly. Genetics in Medicine, 21 (9). pp. 2043-2058. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/s41436-019-0464-7)
MED13L
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Oneda, Beatrice, Sheth, Frenny, Azzarello-Burri, Silvia, Baldinger, Rosa, Joset, Pascal, Latal, Beatrice, Knirsch, Walter, Desai, Soaham, Baumer, Alessandra, Houge, Gunnar, Andrieux, Joris and Rauch, Anita (2013) Dosage changes of MED13L further delineate its role in congenital heart defects and intellectual disability. European Journal of Human Genetics, 21 (10). pp. 1100-1104. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/ejhg.2013.17)
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Zweier, Markus, Gogoll, Laura, Schiffmann, Raphael, Sticht, Heinrich ORCID: 0000-0001-5644-045X , Steindl, Katharina and Rauch, Anita (2017) Genotype-phenotype evaluation of MED13L defects in the light of a novel truncating and a recurrent missense mutation. European Journal of Medical Genetics, 60 (9). pp. 451-464. ISSN 1769-7212 (doi:https://doi.org/10.1016/j.ejmg.2017.06.004)
medical genetics
Asadollahi, Reza ORCID: 0000-0002-1497-0564 (2016) Inspirations in medical genetics. Journal of Medical Biography, 24 (1). pp. 138-140. ISSN 0967-7720 (Print), 1758-1087 (Online) (doi:https://doi.org/10.1177/0967772014525097)
Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Asadollahi, Hamid (2013) Avicenna’s view on medical genetics. Genetics in Medicine, 15 (5). pp. 410-411. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/gim.2013.27)
medical supply chain management
Tripathi, Anuj, Garg, Vivek ORCID: 0000-0002-8515-4759 , Vargis, Binu Kuriakose and Agrawal, Chaitanya P. (2023) Blockchain-enabled secured medical supply chain management. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor & Francis, Boca Raton, pp. 189-210. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
metabolic profiling
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
metabolomics
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
metabonomics
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
methionine dietfolic
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
methods and techniques
Behere, Gajanan T., Tay, Wee Tek, Russell, Derek A., Heckel, David G., Appleton, Belinda R., Kranthi, Keshav R. and Batterham, Philip (2007) Mitochondrial DNA analysis of field populations of Helicoverpa armigera (Lepidoptera: Noctuidae) and of its relationship to H. zea. BMC Evolutionary Biology, 7 (117). pp. 1-10. ISSN 1471-2148 (doi:https://doi.org/10.1186/1471-2148-7-117)
methyl donors
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
methylation food ribo flavinvitamin
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
microalgae
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
microsatellites
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
mitochondria
Boonsawat, Paranchai, Joset, Pascal, Steindl, Katharina, Oneda, Beatrice, Gogoll, Laura, Azzarello-Burri, Silvia, Sheth, Frenny, Datar, Chaitanya, Verma, Ishwar C., Puri, Ratna Dua, Zollino, Marcella, Bachmann-Gagescu, Ruxandra, Niedrist, Dunja, Papik, Michael, Figueiro-Silva, Joana, Masood, Rahim, Zweier, Markus, Kraemer, Dennis, Lincoln, Sharyn, Rodan, Lance, Passemard, Sandrine, Drunat, Séverine, Verloes, Alain, Horn, Anselm H.C., Sticht, Heinrich, Steinfeld, Robert, Plecko, Barbara, Latal, Beatrice, Jenni, Oskar, Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Rauch, Anita (2019) Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly. Genetics in Medicine, 21 (9). pp. 2043-2058. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/s41436-019-0464-7)
Weinrich, Tobias, Hoh Kam, Jaimie, Ferrara, Bill T. ORCID: 0000-0002-2163-4032 , Thompson, Elinor P. ORCID: 0000-0002-6434-9290 , Mitrofanis, John and Jeffery, Glen (2019) A day in the life of mitochondria reveals shifting workloads. Scientific Reports, 9:13898. ISSN 2045-2322 (Print), 2041-1723 (Online) (doi:https://doi.org/10.1038/s41598-019-48383-y)
mitochondrial DNA
Kanyesigye, Dalton, Pius Alibu, Vincent, Tek Tay, Wee, Nalela, Polycarp, Paparu, Pamela, Olaboro, Samuel, Tamusange Nkalubo, Stanley, Siraj Kayondo, Ismail, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Seal, Susan ORCID: 0000-0002-3952-1562 and Hilary Otim, Michael (2022) Population genetic structure of the bean leaf beetle Ootheca mutabilis (Coleoptera: Chrysomelidae) in Uganda. Insects, 13 (6):543. ISSN 2075-4450 (Online) (doi:https://doi.org/10.3390/insects13060543)
mitochondrial function
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
mitogenome
Khayi, Slimane ORCID: 0000-0001-8033-2117 , Armitage, Andrew ORCID: 0000-0002-0610-763X , El Guilli, Mohammed, Meftah Kadmiri, Issam ORCID: 0000-0003-1067-1652 , Lahlali, Rachid, Fokar, Mohamed and Mentag, Rachid ORCID: 0000-0002-2040-637X (2021) Complete mitochondrial genome and phylogeny of the causal agent of Bayoud disease on date palm, Fusarium oxysporum f. sp. albedinis. Mitochondrial DNA Part B, 6 (10). pp. 3059-3061. ISSN 2380-2359 (Print), 2380-2359 (Online) (doi:https://doi.org/10.1080/23802359.2021.1978894)
mobility
Weinrich, Tobias, Xu, Yanan ORCID: 0000-0002-1697-6070 , Wosu, Chiziezi, Harvey, Patricia ORCID: 0000-0001-7193-4570 and Jeffery, Glen (2019) Mitochondrial function, mobility and lifespan are improved in Drosophila melanogaster by extracts of 9-cis-β-Carotene from Dunaliella salina. Marine Drugs, 17 (5). pp. 279-288. ISSN 1660-3397 (Online) (doi:https://doi.org/10.3390/md17050279)
molecular biology
Bartlett, Terence James (1992) Molecular properties of aspartate transcarbamoylase and related enaymes from wheat. PhD thesis, University of Greenwich.
molecular genetics
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R. and Muniyappa, V. (2007) Pumpkin yellow vein mosaic disease is caused by two distinct begomoviruses: complete viral sequences and comparative transmission by an indigenous Bemisia tabaci and the introduced B-biotype. EPPO Bulletin, 37 (2). pp. 412-419. ISSN 0250-8052 (doi:https://doi.org/10.1111/j.1365-2338.2007.01127.x)
molecular genetics (Biochemistry and Molecular Biophysics)
Behere, Gajanan T., Tay, Wee Tek, Russell, Derek A., Heckel, David G., Appleton, Belinda R., Kranthi, Keshav R. and Batterham, Philip (2007) Mitochondrial DNA analysis of field populations of Helicoverpa armigera (Lepidoptera: Noctuidae) and of its relationship to H. zea. BMC Evolutionary Biology, 7 (117). pp. 1-10. ISSN 1471-2148 (doi:https://doi.org/10.1186/1471-2148-7-117)
molecular karyotyping
Popp, Bernt ORCID: 0000-0002-3679-1081 , Krumbiegel, Mandy, Grosch, Janina, Sommer, Annika, Uebe, Steffen, Kohl, Zacharias ORCID: 0000-0002-4147-8866 , Plötz, Sonja, Farrell, Michaela, Trautmann, Udo, Kraus, Cornelia, Ekici, Arif B. ORCID: 0000-0001-6099-7066 , Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Regensburger, Martin ORCID: 0000-0002-2172-7386 , Günther, Katharina, Rauch, Anita, Edenhofer, Frank, Winkler, Jürgen, Winner, Beate and Reis, André ORCID: 0000-0002-6301-6363 (2018) Need for high-resolution genetic analysis in iPSC: results and lessons from the ForIPS consortium. Scientific reports, 8:17201. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-018-35506-0)
molecular markers
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Sseruwagi, P. and Hillocks, Rory (2007) Mitochondrial DNA variability and development of a PCR diagnostic test for populations of the whitefly Bemisia afer (Priesner and Hosny). Molecular Biotechnology, 35 (1). pp. 31-40. ISSN 1073-6085 (doi:https://doi.org/10.1385/MB:35:1:31)
molecular phylogenetics
Morales-Hojas, R., Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Post, R.J. (2007) A preliminary analysis of the population genetics and molecular phylogenetics of Onchocerca volvulus (Nematoda: Filarioidea) using nuclear ribosomal second internal transcribed spacer sequences. Memórias do Instituto Oswaldo Cruz, 102 (7). pp. 879-882. ISSN 0074-0276 (doi:https://doi.org/10.1590/S0074-02762007005000114)
Molecular Targets and Activities
Cockram, James, Hill, Colin, Burns, Corrinne, Arroo, Randoph R. J., Woolley, Jack G., Flockart, Ian, Robinson, Trevor, Atkinson, Christopher J., Davies, Michael J., Dungey, Nigel, Greenland, Andy J., Smith, Lydia L. M. J. and Bentley, Steven (2012) Screening a diverse collection of Artemisia annua germplasm accessions for the antimalarial compound, artemisinin. Plant Genetic Resources, 10 (02). pp. 152-154. ISSN 1479-2621 (Print), 1479-263X (Online) (doi:https://doi.org/10.1017/S1479262112000159)
monocyte-derived dendritic cells
Hudec, Michael, Jurícková, Iva, Riegerová, Kamila, Ovsepian, Saak, Cerná, Marie and O’Leary, Valerie (2022) Enhanced extracellular transfer of HLA-DQ activates CD3+ lymphocytes towards compromised Treg induction in celiac disease. International Journal of Molecular Sciences, 23 (11):6102. ISSN 1661-6596 (doi:https://doi.org/10.3390/ijms23116102)
mutations
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
NAFLD
Christides, Tatiana and Sharp, Paul (2013) Action of iron and fructose on gene expression in human liver cells. In: BioIron Abstracts: American Journal of Hematology. Wiley-Blackwell, London, UK, E232-E232. ISSN 1096-8652 (doi:https://doi.org/10.1002/ajh.23453)
neuroprotection
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
neuroscience
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] A bioinformatic and in situ screen for novel axon guidance molecules. Journal of Neurogenetics, 24 (S1). p. 69. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
Alsbury, Samantha, Okafuji, Tatsuya, Mitchell, Kevin J. and Tear, Guy (2009) A bioinformatic and in situ screen for novel axon guidance molecules. In: Mechanisms of Development. Elsevier Ireland Ltd, S192-S192. ISSN 0925-4773 (doi:https://doi.org/10.1016/j.mod.2009.06.466)
Cate, Marie-Sophie, Alsbury, Samantha, Mitchell, Kevin J. and Tear, Guy (2010) [In: Neurofly 2010 Abstracts] Mud is required for axon guidance at the midline of the Drosophila central nervous system. Journal of Neurogenetics, 24 (S1). p. 81. ISSN 0167-7063 (Print), 1563-5260 (Online) (doi:https://doi.org/10.3109/01677063.2011.534918)
neutral traits
Goudet, Jérôme and Büchi, Lucie ORCID: 0000-0002-1935-6176 (2006) The effects of dominance, regular Inbreeding and sampling design on QST, an estimator of population differentiation for quantitative traits. Genetics, 172 (2). pp. 1337-1347. ISSN 0016-6731 (Print), 1943-2631 (Online) (doi:https://doi.org/10.1534/genetics.105.050583)
NGS
Popp, Bernt ORCID: 0000-0002-3679-1081 , Krumbiegel, Mandy, Grosch, Janina, Sommer, Annika, Uebe, Steffen, Kohl, Zacharias ORCID: 0000-0002-4147-8866 , Plötz, Sonja, Farrell, Michaela, Trautmann, Udo, Kraus, Cornelia, Ekici, Arif B. ORCID: 0000-0001-6099-7066 , Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Regensburger, Martin ORCID: 0000-0002-2172-7386 , Günther, Katharina, Rauch, Anita, Edenhofer, Frank, Winkler, Jürgen, Winner, Beate and Reis, André ORCID: 0000-0002-6301-6363 (2018) Need for high-resolution genetic analysis in iPSC: results and lessons from the ForIPS consortium. Scientific reports, 8:17201. ISSN 2045-2322 (Online) (doi:https://doi.org/10.1038/s41598-018-35506-0)
NMR
Varshavi, Dorna, Varshavi, Dorsa, McCarthy, Nicola, Veselkov, Kirill, Keun, Hector C. and Everett, Jeremy ORCID: 0000-0003-1550-4482 (2021) Metabonomics study of the effects of single copy mutant KRAS in the presence or absence of WT allele using human HCT116 isogenic cell lines. Metabolomics, 17 (12):104. ISSN 1573-3882 (Print), 1573-3890 (Online) (doi:https://doi.org/10.1007/s11306-021-01852-w)
nociception
Ovsepian, Saak and Waxman, Stephen (2023) Gene therapy for chronic pain: emerging opportunities in target-rich peripheral nociceptors. Nature Review Neuroscience, 12 (1):1. pp. 252-265. ISSN 1471-003X (Print), 1471-0048 (Online) (doi:https://doi.org/10.1038/s41583-022-00673-7)
nutrition
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
Hernandez-Vargas, Hector, Castelino, Jovita, Silver, Matt J, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Cros, Marie-Pierre, Durand, Geoffroy, Calvez-Kelm, Florence Le, Prentice, Andrew M, Wild, Christopher P, Moore, Sophie E, Hennig, Branwen J, Herceg, Zdenko, Gong, Yun Yun and Routledge, Michael N (2015) Exposure to aflatoxin B1in uterois associated with DNA methylation in white blood cells of infants in The Gambia. International Journal of Epidemiology, 44 (4). pp. 1238-1248. ISSN 0300-5771 (Print), 1464-3685 (Online) (doi:https://doi.org/10.1093/ije/dyv027)
Politis, Sebastian N, Benini, Elisa, Miest, Joanna Junack ORCID: 0000-0003-2534-0530 , Engrola, Sofia, Sorensen, Sune, Syropoulou, Elisavet, Butts, Ian AE and Tomkiewicz, Jonna (2023) First assessment of prebiotics, probiotics, and synbiotics affecting survival, growth, and gene expression of European eel (Anguilla anguilla) larvae. Aquaculture Research, 2023:1260967. pp. 1-13. ISSN 1355-557X (Print), 1365-2109 (Online) (doi:https://doi.org/10.1155/2023/1260967)
Silver, Matt J., Corbin, Karen D., Hellenthal, Garrett, da Costa, Kerry-Ann, Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E., Owen, Jennifer, Prentice, Andrew M., Hennig, Branwen J. and Zeisel, Steven H. (2015) Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort. FASEB Journal, 29 (8). pp. 3426-3435. ISSN 0892-6638 (Print), 1530-6860 (Online) (doi:https://doi.org/10.1096/fj.15-271056)
oestrogen
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
Onchocerca volvulus
Morales-Hojas, R., Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Post, R.J. (2007) A preliminary analysis of the population genetics and molecular phylogenetics of Onchocerca volvulus (Nematoda: Filarioidea) using nuclear ribosomal second internal transcribed spacer sequences. Memórias do Instituto Oswaldo Cruz, 102 (7). pp. 879-882. ISSN 0074-0276 (doi:https://doi.org/10.1590/S0074-02762007005000114)
onchocerciasis
Morales-Hojas, R., Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Post, R.J. (2007) A preliminary analysis of the population genetics and molecular phylogenetics of Onchocerca volvulus (Nematoda: Filarioidea) using nuclear ribosomal second internal transcribed spacer sequences. Memórias do Instituto Oswaldo Cruz, 102 (7). pp. 879-882. ISSN 0074-0276 (doi:https://doi.org/10.1590/S0074-02762007005000114)
organelle biology
Weinrich, Tobias, Hoh Kam, Jaimie, Ferrara, Bill T. ORCID: 0000-0002-2163-4032 , Thompson, Elinor P. ORCID: 0000-0002-6434-9290 , Mitrofanis, John and Jeffery, Glen (2019) A day in the life of mitochondria reveals shifting workloads. Scientific Reports, 9:13898. ISSN 2045-2322 (Print), 2041-1723 (Online) (doi:https://doi.org/10.1038/s41598-019-48383-y)
Oxidative stress
Temperton, Nigel ORCID: 0000-0002-7978-3815 , Wilkinson, Shane R. and Kelly, John M. (1996) Cloning of an Fe-superoxide dismutase gene homologue from Trypanosoma cruzi. Molecular and Biochemical Parasitology, 76 (1-2). pp. 339-343. ISSN 0166-6851 (doi:https://doi.org/10.1016/0166-6851(95)02553-7)
patch clamp
Begemann, Anaïs, Acuña, Mario A., Zweier, Markus, Vincent, Marie, Steindl, Katharina, Bachmann-Gagescu, Ruxandra, Hackenberg, Annette, Abela, Lucia, Plecko, Barbara, Kroell-Seger, Judith, Baumer, Alessandra, Yamakawa, Kazuhiro, Inoue, Yushi, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Sticht, Heinrich, Zeilhofer, Hanns Ulrich and Rauch, Anita (2019) Further corroboration of distinct functional features in SCN2A variants causing intellectual disability or epileptic phenotypes. Molecular Medicine, 25 (1). ISSN 1076-1551 (Print), 1528-3658 (Online) (doi:https://doi.org/10.1186/s10020-019-0073-6)
phylogenetics
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
phylogenomics
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
phylogeny
THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM; THE UNIVERSITY OF GREENWICH (2018) ALGAL STRAINS. WO/2018/141978.
plant pre-breeding
Cockram, James, Hill, Colin, Burns, Corrinne, Arroo, Randoph R. J., Woolley, Jack G., Flockart, Ian, Robinson, Trevor, Atkinson, Christopher J., Davies, Michael J., Dungey, Nigel, Greenland, Andy J., Smith, Lydia L. M. J. and Bentley, Steven (2012) Screening a diverse collection of Artemisia annua germplasm accessions for the antimalarial compound, artemisinin. Plant Genetic Resources, 10 (02). pp. 152-154. ISSN 1479-2621 (Print), 1479-263X (Online) (doi:https://doi.org/10.1017/S1479262112000159)
Plasmodium falciparum
Cockram, James, Hill, Colin, Burns, Corrinne, Arroo, Randoph R. J., Woolley, Jack G., Flockart, Ian, Robinson, Trevor, Atkinson, Christopher J., Davies, Michael J., Dungey, Nigel, Greenland, Andy J., Smith, Lydia L. M. J. and Bentley, Steven (2012) Screening a diverse collection of Artemisia annua germplasm accessions for the antimalarial compound, artemisinin. Plant Genetic Resources, 10 (02). pp. 152-154. ISSN 1479-2621 (Print), 1479-263X (Online) (doi:https://doi.org/10.1017/S1479262112000159)
population differentiation
Morales-Hojas, R., Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Post, R.J. (2007) A preliminary analysis of the population genetics and molecular phylogenetics of Onchocerca volvulus (Nematoda: Filarioidea) using nuclear ribosomal second internal transcribed spacer sequences. Memórias do Instituto Oswaldo Cruz, 102 (7). pp. 879-882. ISSN 0074-0276 (doi:https://doi.org/10.1590/S0074-02762007005000114)
population genetics
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
population genetics (population studies)
Behere, Gajanan T., Tay, Wee Tek, Russell, Derek A., Heckel, David G., Appleton, Belinda R., Kranthi, Keshav R. and Batterham, Philip (2007) Mitochondrial DNA analysis of field populations of Helicoverpa armigera (Lepidoptera: Noctuidae) and of its relationship to H. zea. BMC Evolutionary Biology, 7 (117). pp. 1-10. ISSN 1471-2148 (doi:https://doi.org/10.1186/1471-2148-7-117)
prebiotics
Politis, Sebastian N, Benini, Elisa, Miest, Joanna Junack ORCID: 0000-0003-2534-0530 , Engrola, Sofia, Sorensen, Sune, Syropoulou, Elisavet, Butts, Ian AE and Tomkiewicz, Jonna (2023) First assessment of prebiotics, probiotics, and synbiotics affecting survival, growth, and gene expression of European eel (Anguilla anguilla) larvae. Aquaculture Research, 2023:1260967. pp. 1-13. ISSN 1355-557X (Print), 1365-2109 (Online) (doi:https://doi.org/10.1155/2023/1260967)
prediction
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
primary microcephaly
Boonsawat, Paranchai, Joset, Pascal, Steindl, Katharina, Oneda, Beatrice, Gogoll, Laura, Azzarello-Burri, Silvia, Sheth, Frenny, Datar, Chaitanya, Verma, Ishwar C., Puri, Ratna Dua, Zollino, Marcella, Bachmann-Gagescu, Ruxandra, Niedrist, Dunja, Papik, Michael, Figueiro-Silva, Joana, Masood, Rahim, Zweier, Markus, Kraemer, Dennis, Lincoln, Sharyn, Rodan, Lance, Passemard, Sandrine, Drunat, Séverine, Verloes, Alain, Horn, Anselm H.C., Sticht, Heinrich, Steinfeld, Robert, Plecko, Barbara, Latal, Beatrice, Jenni, Oskar, Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Rauch, Anita (2019) Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly. Genetics in Medicine, 21 (9). pp. 2043-2058. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/s41436-019-0464-7)
probiotics
Politis, Sebastian N, Benini, Elisa, Miest, Joanna Junack ORCID: 0000-0003-2534-0530 , Engrola, Sofia, Sorensen, Sune, Syropoulou, Elisavet, Butts, Ian AE and Tomkiewicz, Jonna (2023) First assessment of prebiotics, probiotics, and synbiotics affecting survival, growth, and gene expression of European eel (Anguilla anguilla) larvae. Aquaculture Research, 2023:1260967. pp. 1-13. ISSN 1355-557X (Print), 1365-2109 (Online) (doi:https://doi.org/10.1155/2023/1260967)
promoting efficiency
Tripathi, Anuj, Garg, Vivek ORCID: 0000-0002-8515-4759 , Vargis, Binu Kuriakose and Agrawal, Chaitanya P. (2023) Blockchain-enabled secured medical supply chain management. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor & Francis, Boca Raton, pp. 189-210. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
property
Pawlowski, Mark ORCID: 0000-0002-5473-5809 (2009) Property in body parts and products of the human body. Liverpool Law Review, 30 (1). pp. 35-55. ISSN 0144-932X (Print), 1572-8625 (Online) (doi:https://doi.org/10.1007/s10991-009-9052-2)
Pseudomonas
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
quality control
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
quantitative genetics
Goudet, Jérôme and Büchi, Lucie ORCID: 0000-0002-1935-6176 (2006) The effects of dominance, regular Inbreeding and sampling design on QST, an estimator of population differentiation for quantitative traits. Genetics, 172 (2). pp. 1337-1347. ISSN 0016-6731 (Print), 1943-2631 (Online) (doi:https://doi.org/10.1534/genetics.105.050583)
Quast
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
radiotherapy
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Britschgi, Christian, Joset, Pascal, Oneda, Beatrice, Schindler, Detlev ORCID: 0000-0003-2451-8165 , Meier, Urs R. and Rauch, Anita ORCID: 0000-0003-2930-3163 (2020) Severe reaction to radiotherapy provoked by hypomorphic germline mutations in ATM (ataxia–telangiectasia mutated gene). Molecular Genetics and Genomic Medicine, 8 (10):e1409. ISSN 2324-9269 (Online) (doi:https://doi.org/10.1002/mgg3.1409)
real-time PCR
Otti, Gerald, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Kimata, Bernadetha, Mkamillo, Geoffrey, Kumar, Lava, Tomlins, Keith and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2016) High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants. Journal Of Applied Microbiology (Online first), 120 (5). pp. 1346-1356. ISSN 1364-5072 (Print), 1365-2672 (Online) (doi:https://doi.org/10.1111/jam.13043)
red LED
Xu, Yanan ORCID: 0000-0002-1697-6070 and Harvey, Patricia ORCID: 0000-0001-7193-4570 (2019) Red light Control of β-Carotene isomerisation to 9-cis β-carotene and carotenoid accumulation in Dunaliella salina. Antioxidants, 29 (5):2019050218. ISSN 2076-3921 (Online) (doi:https://doi.org/10.3390/antiox8050148)
respiration
Weinrich, Tobias, Hoh Kam, Jaimie, Ferrara, Bill T. ORCID: 0000-0002-2163-4032 , Thompson, Elinor P. ORCID: 0000-0002-6434-9290 , Mitrofanis, John and Jeffery, Glen (2019) A day in the life of mitochondria reveals shifting workloads. Scientific Reports, 9:13898. ISSN 2045-2322 (Print), 2041-1723 (Online) (doi:https://doi.org/10.1038/s41598-019-48383-y)
rough set theory
Sengupta, Shampa, Pal, Kumud Ranjan and Garg, Vivek ORCID: 0000-0002-8515-4759 (2022) Design of an intelligent system for diabetes prediction by integrating rough set theory and genetic algorithm. In: Bagga, Teena, Upreti, Kamal, Kumar, Nishant, Ansari, Amirul Hasan and Nadeem, Danish, (eds.) Designing Intelligent Healthcare Systems, Products, and Services Using Disruptive Technologies and Health Informatics. CRC Press, Taylor Francis, Boca Raton, pp. 157-172. ISBN 978-1003217107 (doi:https://doi.org/10.1201/9781003217107)
SCN2A variants
Begemann, Anaïs, Acuña, Mario A., Zweier, Markus, Vincent, Marie, Steindl, Katharina, Bachmann-Gagescu, Ruxandra, Hackenberg, Annette, Abela, Lucia, Plecko, Barbara, Kroell-Seger, Judith, Baumer, Alessandra, Yamakawa, Kazuhiro, Inoue, Yushi, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Sticht, Heinrich, Zeilhofer, Hanns Ulrich and Rauch, Anita (2019) Further corroboration of distinct functional features in SCN2A variants causing intellectual disability or epileptic phenotypes. Molecular Medicine, 25 (1). ISSN 1076-1551 (Print), 1528-3658 (Online) (doi:https://doi.org/10.1186/s10020-019-0073-6)
seasonal variation
Dominguez Salas, Paula ORCID: 0000-0001-8753-4221 , Moore, Sophie E, Cole, Darren, da Costa, Kerry-Ann, Cox, Sharon E, Dyer, Roger A, Fulford, Anthony JC, Innis, Sheila M, Waterland, Robert A, Zeisel, Steven H, Prentice, Andrew M and Hennig, Branwen J (2013) DNA methylation potential: dietary intake and blood concentrations of one-carbon metabolites and cofactors in rural African women. The American Journal of Clinical Nutrition, 97 (6). pp. 1217-1227. ISSN 0002-9165 (Print), 1938-3207 (Online) (doi:https://doi.org/10.3945/ajcn.112.048462)
secondary microcephaly
Boonsawat, Paranchai, Joset, Pascal, Steindl, Katharina, Oneda, Beatrice, Gogoll, Laura, Azzarello-Burri, Silvia, Sheth, Frenny, Datar, Chaitanya, Verma, Ishwar C., Puri, Ratna Dua, Zollino, Marcella, Bachmann-Gagescu, Ruxandra, Niedrist, Dunja, Papik, Michael, Figueiro-Silva, Joana, Masood, Rahim, Zweier, Markus, Kraemer, Dennis, Lincoln, Sharyn, Rodan, Lance, Passemard, Sandrine, Drunat, Séverine, Verloes, Alain, Horn, Anselm H.C., Sticht, Heinrich, Steinfeld, Robert, Plecko, Barbara, Latal, Beatrice, Jenni, Oskar, Asadollahi, Reza ORCID: 0000-0002-1497-0564 and Rauch, Anita (2019) Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly. Genetics in Medicine, 21 (9). pp. 2043-2058. ISSN 1098-3600 (Print), 1530-0366 (Online) (doi:https://doi.org/10.1038/s41436-019-0464-7)
sensory neurons
Ovsepian, Saak and Waxman, Stephen (2023) Gene therapy for chronic pain: emerging opportunities in target-rich peripheral nociceptors. Nature Review Neuroscience, 12 (1):1. pp. 252-265. ISSN 1471-003X (Print), 1471-0048 (Online) (doi:https://doi.org/10.1038/s41583-022-00673-7)
SHH
Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Strauss, Justin E, Zenker, Martin, Beuing, Oliver ORCID: 0000-0001-8033-063X , Edvardson, Simon, Elpeleg, Orly, Strom, Tim M, Joset, Pascal, Niedrist, Dunja, Otte, Christine, Oneda, Beatrice, Boonsawat, Paranchai, Azzarello-Burri, Silvia, Bartholdi, Deborah, Papik, Michael, Zweier, Markus, Haas, Cordula, Ekici, Arif B ORCID: 0000-0001-6099-7066 , Baumer, Alessandra, Boltshauser, Eugen, Steindl, Katharina, Nothnagel, Michael ORCID: 0000-0001-8305-7114 , Schinzel, Albert, Stoeckli, Esther T and Rauch, Anita ORCID: 0000-0003-2930-3163 (2018) Clinical and experimental evidence suggest a link between KIF7 and C5orf42-related ciliopathies through Sonic Hedgehog signaling. European Journal of Human Genetics, 26 (2). pp. 197-209. ISSN 1018-4813 (Print), 1476-5438 (Online) (doi:https://doi.org/10.1038/s41431-017-0019-9)
simulations
Goudet, Jérôme and Büchi, Lucie ORCID: 0000-0002-1935-6176 (2006) The effects of dominance, regular Inbreeding and sampling design on QST, an estimator of population differentiation for quantitative traits. Genetics, 172 (2). pp. 1337-1347. ISSN 0016-6731 (Print), 1943-2631 (Online) (doi:https://doi.org/10.1534/genetics.105.050583)
SPG11
Krumm, Laura, Pozner, Tatyana, Kaindl, Johanna, Regensburger, Martin, Günther, Claudia, Turan, Soeren, Asadollahi, Reza ORCID: 0000-0002-1497-0564 , Rauch, Anita and Winner, Beate (2021) Generation and characterization of an endogenously tagged SPG11-human iPSC line by CRISPR/Cas9 mediated knock-in. Stem Cell Research, 56:102520. ISSN 1873-5061 (doi:https://doi.org/10.1016/j.scr.2021.102520)
strains
Morales-Hojas, R., Cheke, Robert A. ORCID: 0000-0002-7437-1934 and Post, R.J. (2007) A preliminary analysis of the population genetics and molecular phylogenetics of Onchocerca volvulus (Nematoda: Filarioidea) using nuclear ribosomal second internal transcribed spacer sequences. Memórias do Instituto Oswaldo Cruz, 102 (7). pp. 879-882. ISSN 0074-0276 (doi:https://doi.org/10.1590/S0074-02762007005000114)
THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM; THE UNIVERSITY OF GREENWICH (2018) ALGAL STRAINS. WO/2018/141978.
subject-specific teacher training
Pecorino, Lauren, Grose, Richard and Uysal-Onganer, Pinar (2018) Workshops for subject-specific teachers’ training: A case study for teaching cancer biology. Compass: The Journal of Learning and Teaching at the University of Greenwich, 11 (2). ISSN 2044-0081 (doi:https://doi.org/10.21100/compass.v11i2.749)
TaqMan assays
Otti, Gerald, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Kimata, Bernadetha, Mkamillo, Geoffrey, Kumar, Lava, Tomlins, Keith and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2016) High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants. Journal Of Applied Microbiology (Online first), 120 (5). pp. 1346-1356. ISSN 1364-5072 (Print), 1365-2672 (Online) (doi:https://doi.org/10.1111/jam.13043)
TE annotation
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)
toxins
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
transcriptome assembly
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
transgender
Zhang, Grace, Devo, Perry ORCID: 0000-0003-1487-8896 , O'Leary, Valerie B. ORCID: 0000-0003-1171-9830 and Ovsepian, Saak ORCID: 0000-0002-9522-4159 (2023) Ageing perspective on cognitive outcomes from auxiliary reproductive hormone adjustments. Heliyon, 9 (8):E19050. pp. 1-7. ISSN 2405-8440 (Online) (doi:https://doi.org/10.1016/j.heliyon.2023.e19050)
transposable elements
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)
transposons
Campbell, Lahcen, Nwezeobi, Joachim, van Brunschot, Sharon ORCID: 0000-0002-9634-9463 , Kaweesi, Tadeo, Seal, Susan ORCID: 0000-0002-3952-1562 , Swamy, Rekha, Namuddu, Annet, Maslen, Gareth L., Mugerwa, Habibu, Armean, Irina M., Haggerty, Leanne, Martin, Fergal J., Malka, Osnat, Santos-Garcia, Diego, Juravel, Ksenia, Morin, Shai, Stephens, Michael E., Muhindira, Paul Visendi, Kersey, Paul J., Maruthi, M.N. ORCID: 0000-0002-8060-866X , Omongo, Christopher A., Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Mohammed, Ibrahim Umar, Wang, Hua-Ling, Onyeka, Joseph, Alicai, Titus and Colvin, John (2023) Comparative evolutionary analyses of eight whitefly Bemisia tabaci sensu lato genomes: cryptic species, agricultural pests and plant-virus vectors. BMC Genomics, 24:408. ISSN 1471-2164 (Online) (doi:https://doi.org/10.1186/s12864-023-09474-3)
Vega-Estévez, Samuel, Armitage, Andrew ORCID: 0000-0002-0610-763X , Bates, Helen J., Harrison, Richard J. and Buscaino, Alessia ORCID: 0000-0002-1704-3168 (2021) The genome of the CTG(Ser1) yeast Scheffersomyces stipitis is plastic. mBio, 12 (5). ISSN 2150-7511 (Print), 2150-7511 (Online) (doi:https://doi.org/10.1128/mBio.01871-21)
Trimmomatic
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
trinity
Sewe, Steven, Silva, Goncalo ORCID: 0000-0001-5544-2947 , Sicat, Juan Paolo, Seal, Susan ORCID: 0000-0002-3952-1562 and Muhindira, Paul Visendi (2022) Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data. In: Edwards, David, (ed.) Plant Bioinformatics. Methods in Molecular Biology. Springer Protocols, 2443 . Humana Press - Springer Nature, New York, United States, pp. 211-232. ISBN 978-1071620663 ; 978-1071620670 (doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
Trypanosoma cruzi
Temperton, Nigel ORCID: 0000-0002-7978-3815 , Wilkinson, Shane R. and Kelly, John M. (1996) Cloning of an Fe-superoxide dismutase gene homologue from Trypanosoma cruzi. Molecular and Biochemical Parasitology, 76 (1-2). pp. 339-343. ISSN 0166-6851 (doi:https://doi.org/10.1016/0166-6851(95)02553-7)
type III effectors
Hulin, Michelle T., Armitage, Andrew D. ORCID: 0000-0002-0610-763X , Vicente, Joana G., Holub, Eric B., Baxter, Laura, Bates, Helen J., Mansfield, John W., Jackson, Robert W. and Harrison, Richard J. ORCID: 0000-0002-3307-3519 (2018) Comparative genomics of Pseudomonas syringae reveals convergent gene gain and loss associated with specialization onto cherry (Prunus avium). New Phytologist, 219 (2). pp. 672-696. ISSN 0028-646X (Print), 1469-8137 (Online) (doi:https://doi.org/10.1111/nph.15182)
university teaching
Pecorino, Lauren, Grose, Richard and Uysal-Onganer, Pinar (2018) Workshops for subject-specific teachers’ training: A case study for teaching cancer biology. Compass: The Journal of Learning and Teaching at the University of Greenwich, 11 (2). ISSN 2044-0081 (doi:https://doi.org/10.21100/compass.v11i2.749)
venturia inaequalis genome
Passey, Thomas A. J. ORCID: 0000-0002-5678-2481 , Armitage, Andrew D. ORCID: 0000-0002-0610-763X and Xu, Xiangming (2018) Annotated draft genome sequence of the apple scab pathogen Venturia inaequalis. Microbiology Resource Announcements, 7 (12):e01062-18. ISSN 2576-098X (Online) (doi:https://doi.org/10.1128/mra.01062-18)
virus detection and quantification
Otti, Gerald, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 , Kimata, Bernadetha, Mkamillo, Geoffrey, Kumar, Lava, Tomlins, Keith and Maruthi, M.N. ORCID: 0000-0002-8060-866X (2016) High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants. Journal Of Applied Microbiology (Online first), 120 (5). pp. 1346-1356. ISSN 1364-5072 (Print), 1365-2672 (Online) (doi:https://doi.org/10.1111/jam.13043)
virus-specific primers
Maruthi, M.N. ORCID: 0000-0002-8060-866X , Rekha, A.R., Mirza, S.H., Alam, S.N. and Colvin, John (2007) PCR-based detection and partial genome sequencing indicate high genetic diversity in Bangladeshi begomoviruses and their whitefly vector, Bemisia tabaci. Virus Genes, 34 (3). pp. 373-385. ISSN 0920-8569 (doi:https://doi.org/10.1007/s11262-006-0027-2)
WGS
Banos, G, Lindsay, V, Desta, TT, Bettridge, Judy ORCID: 0000-0002-3917-4660 , Sanchez-Molano, E, Vallejo-Trujillo, A, Matika, O, Dessie, T, Wigley, P, Christley, R, Kaiser, P, Hanotte, O and Psifidi, A (2020) Integrating genetic and genomic analyses of combined health data across ecotypes to improve disease resistance in indigenous African chickens. Frontiers in Genetics, 11. p. 543890. ISSN 1664-8021 (Online) (doi:https://doi.org/10.3389/fgene.2020.543890)
whitefly
Sicat, Juan Paolo A., Visendi, Paul, Sewe, Steven, Bouvaine, Sophie ORCID: 0000-0002-0788-3243 and Seal, Susan ORCID: 0000-0002-3952-1562 (2022) Characterization of transposable elements within the Bemisia tabaci species complex. Mobile DNA, 13 (12). ISSN 1759-8753 (Online) (doi:https://doi.org/10.1186/s13100-022-00270-6)