Items where Author is "Sicat, Juan Paolo"
![]() | Up a level |
Busco
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
Fastqc
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
Illumina adapters
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
quality control
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
Quast
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
transcriptome assembly
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
Trimmomatic
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)
trinity
Sewe, Steven, Silva, Goncalo
ORCID: 0000-0001-5544-2947
, Sicat, Juan Paolo, Seal, Susan
ORCID: 0000-0002-3952-1562
and Muhindira, Paul Visendi
(2022)
Trimming and validation of Illumina short reads using Trimmomatic, trinity assembly, and assessment of RNA-Seq Data.
In: Edwards, David, (ed.)
Plant Bioinformatics. Methods in Molecular Biology.
Springer Protocols, 2443
.
Humana Press - Springer Nature, New York, United States, pp. 211-232.
ISBN 978-1071620663 ; 978-1071620670
(doi:https://doi.org/10.1007/978-1-0716-2067-0_11)