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Items where Author is "Akoko, James"

Items where Author is "Akoko, James"

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AMR antimicrobial resistance bacterial genomics campylobacter chickens E coli E. coli epidemiology food microbiology Food system genomics infectious disease kenya mapping markets mobile genetic elements Nairobi One Health prevalence ruminant products urbanization value chain
Number of items: 22.

AMR

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:10.1186/s12916-022-02677-7)

antimicrobial resistance

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:10.1186/s12916-022-02677-7)

bacterial genomics

Muloi, Dishon, Wee, Bryan, McClean, Deirdre, Ward, Melissa, Pankhurst, Louise, Phan, Hang, Ivens, Alasdair, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Hassell, James, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Nakamura, Yukiko, Alumasa, Lorren, Furmage, Erin, Kaitho, Titus, Ohgren, Elin, Amanya, Fredrick, Ogendo, Allan, Wilson, Daniel, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kiiru, John, Kyobutungi, Catharine, Tacoli, Cecilia, Kang'ethe, Erastus, Davila, Julio, Kariuki, Sam, Robinson, Timothy, Rushton, Jonathan, Woolhouse, Mark and Fevre, Eric (2022) Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape. Nature Microbiology, 7. pp. 581-589. ISSN 2058-5276 (Online) (doi:10.1038/s41564-022-01079-y)

campylobacter

Carron, Maud, Chang, Yu-Mei, Momanyi, Kelvin, Akoko, James, Kiiru, John, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Chaloner, Gemma, Rushton, Jonathan, O'Brien, Sarah, Williams, Nicola, Fevre, Eric M. and Haesler, Barbara (2018) Campylobacter, a zoonotic pathogen of global importance: prevalence and risk factors in the fast-evolving chicken meat system of Nairobi, Kenya. PLoS Neglected Tropical Diseases, 12 (8):e0006658. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:10.1371/journal.pntd.0006658)

chickens

Carron, Maud, Chang, Yu-Mei, Momanyi, Kelvin, Akoko, James, Kiiru, John, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Chaloner, Gemma, Rushton, Jonathan, O'Brien, Sarah, Williams, Nicola, Fevre, Eric M. and Haesler, Barbara (2018) Campylobacter, a zoonotic pathogen of global importance: prevalence and risk factors in the fast-evolving chicken meat system of Nairobi, Kenya. PLoS Neglected Tropical Diseases, 12 (8):e0006658. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:10.1371/journal.pntd.0006658)

E coli

Hassell, James M. ORCID logoORCID: https://orcid.org/0000-0002-4710-2827, Muloi, Dishon M., VanderWaal, Kimberly L. ORCID logoORCID: https://orcid.org/0000-0002-5764-6430, Ward, Melissa J., Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Gitahi, Nduhiu ORCID logoORCID: https://orcid.org/0000-0001-6302-5908, Ouko, Tom, Imboma, Titus, Akoko, James, Karani, Maurice ORCID logoORCID: https://orcid.org/0000-0001-6467-4352, Muinde, Patrick ORCID logoORCID: https://orcid.org/0000-0003-3907-7710, Nakamura, Yukiko ORCID logoORCID: https://orcid.org/0000-0002-3379-0526, Alumasa, Lorren ORCID logoORCID: https://orcid.org/0000-0002-1723-0510, Furmaga, Erin, Kaitho, Titus, Amanya, Fredrick, Ogendo, Allan, Fava, Francesco ORCID logoORCID: https://orcid.org/0000-0003-3748-7417, Wee, Bryan A., Phan, Hang, Kiiru, John, Kang’ethe, Erastus, Kariuki, Sam ORCID logoORCID: https://orcid.org/0000-0003-3209-9503, Robinson, Timothy, Begon, Michael ORCID logoORCID: https://orcid.org/0000-0003-1715-5327, Woolhouse, Mark E. J. and Fèvre, Eric M. ORCID logoORCID: https://orcid.org/0000-0001-8931-4986 (2023) Epidemiological connectivity between humans and animals across an urban landscape. Proceedings of the National Academy of Sciences, 120 (29):e2218860120. pp. 1-12. ISSN 0027-8424 (Print), 1091-6490 (Online) (doi:10.1073/pnas.2218860120)

E. coli

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:10.1186/s12916-022-02677-7)

epidemiology

Muloi, Dishon, Wee, Bryan, McClean, Deirdre, Ward, Melissa, Pankhurst, Louise, Phan, Hang, Ivens, Alasdair, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Hassell, James, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Nakamura, Yukiko, Alumasa, Lorren, Furmage, Erin, Kaitho, Titus, Ohgren, Elin, Amanya, Fredrick, Ogendo, Allan, Wilson, Daniel, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kiiru, John, Kyobutungi, Catharine, Tacoli, Cecilia, Kang'ethe, Erastus, Davila, Julio, Kariuki, Sam, Robinson, Timothy, Rushton, Jonathan, Woolhouse, Mark and Fevre, Eric (2022) Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape. Nature Microbiology, 7. pp. 581-589. ISSN 2058-5276 (Online) (doi:10.1038/s41564-022-01079-y)

food microbiology

Carron, Maud, Chang, Yu-Mei, Momanyi, Kelvin, Akoko, James, Kiiru, John, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Chaloner, Gemma, Rushton, Jonathan, O'Brien, Sarah, Williams, Nicola, Fevre, Eric M. and Haesler, Barbara (2018) Campylobacter, a zoonotic pathogen of global importance: prevalence and risk factors in the fast-evolving chicken meat system of Nairobi, Kenya. PLoS Neglected Tropical Diseases, 12 (8):e0006658. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:10.1371/journal.pntd.0006658)

Food system

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

genomics

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:10.1186/s12916-022-02677-7)

infectious disease

Muloi, Dishon, Wee, Bryan, McClean, Deirdre, Ward, Melissa, Pankhurst, Louise, Phan, Hang, Ivens, Alasdair, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Hassell, James, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Nakamura, Yukiko, Alumasa, Lorren, Furmage, Erin, Kaitho, Titus, Ohgren, Elin, Amanya, Fredrick, Ogendo, Allan, Wilson, Daniel, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kiiru, John, Kyobutungi, Catharine, Tacoli, Cecilia, Kang'ethe, Erastus, Davila, Julio, Kariuki, Sam, Robinson, Timothy, Rushton, Jonathan, Woolhouse, Mark and Fevre, Eric (2022) Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape. Nature Microbiology, 7. pp. 581-589. ISSN 2058-5276 (Online) (doi:10.1038/s41564-022-01079-y)

kenya

Carron, Maud, Chang, Yu-Mei, Momanyi, Kelvin, Akoko, James, Kiiru, John, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Chaloner, Gemma, Rushton, Jonathan, O'Brien, Sarah, Williams, Nicola, Fevre, Eric M. and Haesler, Barbara (2018) Campylobacter, a zoonotic pathogen of global importance: prevalence and risk factors in the fast-evolving chicken meat system of Nairobi, Kenya. PLoS Neglected Tropical Diseases, 12 (8):e0006658. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:10.1371/journal.pntd.0006658)

mapping

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

markets

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

mobile genetic elements

Hassell, James M. ORCID logoORCID: https://orcid.org/0000-0002-4710-2827, Muloi, Dishon M., VanderWaal, Kimberly L. ORCID logoORCID: https://orcid.org/0000-0002-5764-6430, Ward, Melissa J., Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Gitahi, Nduhiu ORCID logoORCID: https://orcid.org/0000-0001-6302-5908, Ouko, Tom, Imboma, Titus, Akoko, James, Karani, Maurice ORCID logoORCID: https://orcid.org/0000-0001-6467-4352, Muinde, Patrick ORCID logoORCID: https://orcid.org/0000-0003-3907-7710, Nakamura, Yukiko ORCID logoORCID: https://orcid.org/0000-0002-3379-0526, Alumasa, Lorren ORCID logoORCID: https://orcid.org/0000-0002-1723-0510, Furmaga, Erin, Kaitho, Titus, Amanya, Fredrick, Ogendo, Allan, Fava, Francesco ORCID logoORCID: https://orcid.org/0000-0003-3748-7417, Wee, Bryan A., Phan, Hang, Kiiru, John, Kang’ethe, Erastus, Kariuki, Sam ORCID logoORCID: https://orcid.org/0000-0003-3209-9503, Robinson, Timothy, Begon, Michael ORCID logoORCID: https://orcid.org/0000-0003-1715-5327, Woolhouse, Mark E. J. and Fèvre, Eric M. ORCID logoORCID: https://orcid.org/0000-0001-8931-4986 (2023) Epidemiological connectivity between humans and animals across an urban landscape. Proceedings of the National Academy of Sciences, 120 (29):e2218860120. pp. 1-12. ISSN 0027-8424 (Print), 1091-6490 (Online) (doi:10.1073/pnas.2218860120)

Nairobi

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

One Health

Muloi, Dishon, Hassell, James, Wee, Bryan, Ward, Melissa, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Kivali, Velma, Kiyong'a, Alice, Ndinda, Christine, Gitahi, Nduhiu, Ouko, Tom, Imboma, Titus, Akoko, James, Murungi, Maurice, Njoroge, Samuel, Muinde, Patrick, Alumasa, Lorren, Kaitho, Titus, Amanya, Frederic, Ogendo, Allan, van Bunnik, Bram, Kiiru, John, Robinson, Timothy, Kang'ethe, Erastus, Kariuki, Sam, Pederson, Amy, Fevre, Eric and Woolhouse, Mark (2022) Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Medicine, 20:471. pp. 1-11. ISSN 1741-7015 (Online) (doi:10.1186/s12916-022-02677-7)

prevalence

Carron, Maud, Chang, Yu-Mei, Momanyi, Kelvin, Akoko, James, Kiiru, John, Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Chaloner, Gemma, Rushton, Jonathan, O'Brien, Sarah, Williams, Nicola, Fevre, Eric M. and Haesler, Barbara (2018) Campylobacter, a zoonotic pathogen of global importance: prevalence and risk factors in the fast-evolving chicken meat system of Nairobi, Kenya. PLoS Neglected Tropical Diseases, 12 (8):e0006658. ISSN 1935-2727 (Print), 1935-2735 (Online) (doi:10.1371/journal.pntd.0006658)

ruminant products

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

urbanization

Hassell, James M. ORCID logoORCID: https://orcid.org/0000-0002-4710-2827, Muloi, Dishon M., VanderWaal, Kimberly L. ORCID logoORCID: https://orcid.org/0000-0002-5764-6430, Ward, Melissa J., Bettridge, Judy ORCID logoORCID: https://orcid.org/0000-0002-3917-4660, Gitahi, Nduhiu ORCID logoORCID: https://orcid.org/0000-0001-6302-5908, Ouko, Tom, Imboma, Titus, Akoko, James, Karani, Maurice ORCID logoORCID: https://orcid.org/0000-0001-6467-4352, Muinde, Patrick ORCID logoORCID: https://orcid.org/0000-0003-3907-7710, Nakamura, Yukiko ORCID logoORCID: https://orcid.org/0000-0002-3379-0526, Alumasa, Lorren ORCID logoORCID: https://orcid.org/0000-0002-1723-0510, Furmaga, Erin, Kaitho, Titus, Amanya, Fredrick, Ogendo, Allan, Fava, Francesco ORCID logoORCID: https://orcid.org/0000-0003-3748-7417, Wee, Bryan A., Phan, Hang, Kiiru, John, Kang’ethe, Erastus, Kariuki, Sam ORCID logoORCID: https://orcid.org/0000-0003-3209-9503, Robinson, Timothy, Begon, Michael ORCID logoORCID: https://orcid.org/0000-0003-1715-5327, Woolhouse, Mark E. J. and Fèvre, Eric M. ORCID logoORCID: https://orcid.org/0000-0001-8931-4986 (2023) Epidemiological connectivity between humans and animals across an urban landscape. Proceedings of the National Academy of Sciences, 120 (29):e2218860120. pp. 1-12. ISSN 0027-8424 (Print), 1091-6490 (Online) (doi:10.1073/pnas.2218860120)

value chain

Alarcon, Pablo ORCID logoORCID: https://orcid.org/0000-0001-9040-7629, Fèvre, Eric M., Murungi, Maurice K., Muinde, Patrick, Akoko, James, Dominguez Salas, Paula ORCID logoORCID: https://orcid.org/0000-0001-8753-4221, Kiambi, Stella, Ahmed, Sohel, Häsler, Barbara and Rushton, Jonathan ORCID logoORCID: https://orcid.org/0000-0001-5450-4202 (2017) Mapping of beef, sheep and goat food systems in Nairobi — A framework for policy making and the identification of structural vulnerabilities and deficiencies. Agricultural Systems, 152. pp. 1-17. ISSN 0308521X (Print), 0308-521X (Online) (doi:10.1016/j.agsy.2016.12.005)

This list was generated on Sun Dec 22 13:16:42 2024 UTC.