Berberine, imidacloprid, neurotoxicity, cerebellum, pyroptosis, Alzheimer's disease, nano-PEGylated liposomes.

Bayoumie El Gazzar, Walaa, Farag, Amina A., Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Bayoumi, Heba, Youssef, Heba S., Mohammed Marei, Yasmin, Mohamed, Shimaa K., Marei, Azza M., Abdelfatah, Reham M., Moustafa Mahmoud, Manal, Ahmed Fahmy Aboelkomsan, Elshaimaa, Kamel M. Khalfallah, Eman and Magdy Anwer, Hala (2024) Berberine chloride loaded nano‐PEGylated liposomes attenuates imidacloprid‐induced neurotoxicity by inhibiting NLRP3/Caspase‐1/GSDMD‐mediated pyroptosis. BioFactors, 51 (1):e2107. ISSN 0951-6433 (Print), 1872-8081 (Online) (doi:10.1002/biof.2107)

Bovine mastitis, biomarkers, haptoglobin, etiological agents, multiplex real-time PCR

El-Demerdash, Azza S., Bakry, Neveen R., Aggour, Mohamed G., Elmasry, Sahar S., Mowafy, Rehab E., Erfan, Ahmed, Taha, Mohamed F., El-Gmaal, Adel A.A.M., Mohamed, Abeer A.E., Hagag, Naglaa and Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480 (2022) Bovine Mastitis in Egypt: bacterial etiology and evaluation of diagnostic biomarkers. International Journal of Veterinary Science (IJVS), 12 (1). pp. 60-69. ISSN 2304‑3075 (Print), 2305‑4360 (Online) (doi:10.47278/journal.ijvs/2022.161)

COVID-19, biomarker, machine learning

Elgedawy, Gamalat A., Samir Ahmed Mohamed, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Elabd, Naglaa S. ORCID: https://orcid.org/0000-0001-8786-0190, Elsaid, Hala H., Enar, Mohamed, Salem, Radwa H., Montaser, Belal A., AboShabaan, Hind S., Seddik, Randa M., El-Askaeri, Shimaa M. ORCID: https://orcid.org/0000-0003-0588-9761, Omar, Marwa M. and Helal, Marwa L. (2024) Metabolic profiling during COVID-19 infection in humans: Identification of potential biomarkers for occurrence, severity and outcomes using machine learning. PLoS ONE, 19 (5):e0302977. ISSN 1932-6203 (Online) (doi:10.1371/journal.pone.0302977)

COVID-19, machine learning, modelling, biomarkers

Amer, Rania M., Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Gaber, Osama A., EL-Deeb, Nahawand A., Abdelmoaty, Ahmed A., Ahmed, Alshymaa A., Samy, Walaa, Atta, Amal H., Walaa, Mohammad and Anis, Reham H. (2021) Diagnostic performance of rapid antigen test for COVID-19 and the effect of viral load, sampling time, subject’s clinical and laboratory parameters on test accuracy. Journal of Infection and Public Health, 14 (10). pp. 1446-1453. ISSN 1876-0341 (doi:10.1016/j.jiph.2021.06.002)

Color Doppler ultrasonography, environmental heat stress, goats, melatonin, MiRNAs, reproductive hormones, ovarian hemodynamics, superovulation

Samir, Haney, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Radwan, Faten, Mandour, Ahmed S., El-Sherbiny, Hossam R., Ahmed, Ahmed Ezzat, Al Syaad, Khalid M., Al-Saeed, Fatimah A. and Watanabe, Gen (2023) Effect of pre-treatment of melatonin on superovulation response, circulatory hormones, and miRNAs in goats during environmental heat stress conditions. Veterinary Research Communications, 48. pp. 459-474. ISSN 0165-7380 (Print), 1573-7446 (Online) (doi:10.1007/s11259-023-10239-2)

Klebsiella spp, ESBL, heamato-biochemical; antibiotics, MDR, virulence, resistant, hemobiogram, leucogram, cattle farms

Ibrahim, Ghada A., Helal, Mohamed Sayed, Kamoura, Nahed Abd Elhafeeze, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Mazid, Amira Mohamed and Farag, Mohamed F.M. (2023) Molecular studies on some virulent and multi-drug resistant cattle Klebsiella strains and their heamatobiochemical impacts. Advances in Animal and Veterinary Sciences, 11 (3). pp. 485-498. ISSN 2307-8316 (Online) (doi:10.17582/journal.aavs/2023/11.3.485.498)

MRSA, bacterial diversity, multivariate statistics, antimicrobial resistance

El-Hamid, Marwa I. Abd, Sewid, Alaa H., Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Hegazy, Wael A. H., Bahnass, Mosa M., Mosbah, Rasha A., Ghaith, Doaa M., Khalifa, Eman, Ramadan, Hazem, Alshareef, Walaa A., Alshareef, Hanan M., Ghoneim, Mohammed M., Al-Sanea, Mohammad M. and Bendary, Mahmoud M. (2022) Clonal diversity and epidemiological characteristics of ST239-MRSA strains. Frontiers in Cellular and Infection Microbiology, 12 (782045). pp. 568-583. ISSN 2235-2988 (Online) (doi:10.3389/fcimb.2022.782045)

P. aeruginosa , Antimicrobial resistance, microbial virulence, machine learning

Abou Elez, Rasha M. M., Zahra, Eman Mohamed Fayek, Gharieb, Rasha M. A., Mohamed, Mohamed Elsayed Mohamed, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Saad, Alaaeldin Mohamed and Merwad, Abdallah Mohamed Amin (2024) Resistance patterns, virulence determinants, and biofilm genes of multidrug-resistant Pseudomonas aeruginosa isolated from fish and fish handlers. Scientific Reports, 14:24063. ISSN 2045-2322 (Online) (doi:10.1038/s41598-024-73917-4)

VRSA, MRSA, multidrug resistance, biofilm, ready-to-eat meat, S. aureus, food handlers, patients

Saber, Taisir, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, El-Mekkawy, Rasha M., Ariny, Eman, El-Sayed, Sara Ramadan, Enan, Gamal, Abdelatif, Sawasn H., Askora, Ahmed, Merwad, Abdallah M. A. and Tartor, Yasmine H. (2022) Methicillin- and Vancomycin-resistant staphylococcus aureus from humans and ready-to-eat meat: characterization of antimicrobial resistance and biofilm formation ability. Frontiers in Microbiology, 12:735494. ISSN 1664-302X (Online) (doi:10.3389/fmicb.2021.735494)

antimicrobial resistance, machine learning, bacterial virulence

Tartor, Yasmine H., EL-Naenaeey, El-Sayed Y., Abdallah, Hossam M., Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Yassen, Mayada M. and Abdelwahab, Ashraf M. (2021) Virulotyping and genetic diversity of Aeromonas hydrophila isolated from Nile tilapia (Oreochromis niloticus) in aquaculture farms in Egypt. Aquaculture, 541 (3):736781. ISSN 0044-8486 (Print), 1873-5622 (Online) (doi:10.1016/j.aquaculture.2021.736781)

avian species, epidemiological mapping, histopathological features, molecular characterization, multidrug resistance, Pasteurella multocida

El-Demerdash, Azza S. ORCID: https://orcid.org/0000-0002-0825-9776, Mowafy, Rehab E., Fahmy, Hanan A., Matter, Ahmed A. and Samir Ahmed Mohamed, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480 (2023) Pathognomonic features of Pasteurella multocida isolates among various avian species in Sharkia Governorate, Egypt. World Journal of Microbiology and Biotechnology, 39:335. ISSN 0959-3993 (Print), 1573-0972 (Online) (doi:10.1007/s11274-023-03774-2)

behavior changes, caspase-3, CD3, CD138, immunohistochemistry, T. gondii

Etewa, Samia E, Sarhan, Mohamed H, Moawad, Howayda SF, Mohammad, Samira M, Samir, Mohamed A ORCID: https://orcid.org/0000-0002-1166-0480, Kandil, Ahmad M and Mostafa, Eman M (2021) Behavior and neuropsychiatric changes in experimental chronic toxoplasmosis: histopathological and immunohistochemical studies. Parasitologists United Journal, 14 (2). pp. 183-192. ISSN 1687‑7942 (Print), 2090‑2646 (Online) (doi:10.21608/puj.2021.75319.1120)

biomarker, chronic obstructive pulmonary disease, emphysema, gene expression, lung tissue, infection, long noncoding RNA, pneumonia, miRNA, PIWI-associated RNA, Prokineticin 2, transcription

Sohail, Aaqib, Waqas, Fakhar H., Braubach, Peter, Czichon, Laurien, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Iqbal, Azeem, de Araujo, Leonardo, Pleschka, Stephan, Steinert, Michael, Geffers, Robert and Pessler, Frank (2024) Differential transcriptomic host responses in the early phase of viral and bacterial infections in human lung tissue explants ex vivo. Respiratory Research, 25:369. ISSN 1465-9921 (Print), 1465-993X (Online) (doi:10.1186/s12931-024-02988-8)

disinfection, formalin, caustic soda, Egypt, H5N1, H9N2

Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, Elbana, Mariam Hassan, Saad, Alaaeldin Mohamed, Abass, Amany and Farag, Gamelat K. (2023) Inactivation of avian influenza viruses by chemical disinfectants and the influence of faecal matter. Alexandria Journal of Veterinary Sciences (AJVS), 76 (1). pp. 96-107. ISSN 1110-2047 (Print), 2536‑9520 (Online) (doi:10.5455/ajvs.134044)

miRNA, piRNA, long non-coding, infectious diseases, veterinary medicine

Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480 (2023) Editorial. Host response to veterinary infectious diseases: role of coding and non-coding RNAs as biomarkers and disease modulators. Frontiers in Veterinary Science, 10:1275169. pp. 568-583. ISSN 2297-1769 (Online) (doi:10.3389/fvets.2023.1275169)

pulmonary tuberculosis, microRNAs, small non-coding RNAs, biomarkers

El-Masry, Eman A., Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480 and Taha, Ahmed E. ORCID: https://orcid.org/0000-0002-5766-4495 (2024) Candidate blood microRNAs as potential biomarkers in patients with active and latent pulmonary tuberculosis infection. Journal of Pure and Applied Microbiology (JPAM), 18 (1):9131. pp. 568-583. ISSN 0973-7510 (Print), 2581-690X (Online) (doi:10.22207/JPAM.18.1.40)

red osier dogwood extract, DDGS, high grain diet, RUSITEC, fermentation pattern

Gomaa, Walaa Mohamed Sayed, Saleem, Atef Mohamed, Ran, Tao, Jin, Long, Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480, McGeough, Emma J., Ominski, Kim, Chen, Lingyun and Yang, Wenzhu (2021) Effect of dried distillers grains with solubles and red osier dogwood extract on fermentation pattern and microbial profiles of a high-grain diet in an Artificial rumen system. Frontiers in Veterinary Science, 8:644738. pp. 459-474. ISSN 2297-1769 (Online) (doi:10.3389/fvets.2021.644738)

salmonella, machine learning, antimicrobial resistance, virulence, bacterial fitness

El-Aziz, Norhan K. Abd, Tartor, Yasmine H., Gharieb, Rasha M. A., Erfan, Ahmed M., Khalifa, Eman, Said, Mahmoud A., Ammar, Ahmed M. and Samir, Mohamed ORCID: https://orcid.org/0000-0002-1166-0480 (2021) Extensive drug-resistant salmonella enterica isolated from poultry and humans: prevalence and molecular determinants behind the co-resistance to Ciprofloxacin and Tigecycline. Frontiers in Microbiology, 12:738784. ISSN 1664-302X (Online) (doi:10.3389/fmicb.2021.738784)